DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMTC3 and Spag1

DIOPT Version :10

Sequence 1:NP_861448.2 Gene:TMTC3 / 160418 HGNCID:26899 Length:914 Species:Homo sapiens
Sequence 2:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster


Alignment Length:279 Identity:57/279 - (20%)
Similarity:88/279 - (31%) Gaps:114/279 - (40%)


- Green bases have known domain annotations that are detailed below.


Human   100 ALPGHT----GTYILQTLNRQFQTEVGYGHMQVYEILAPPTVMANDTA------------LVERR 148
            :|.|.|    ||.::..:..::...:    |..:.::..|.|  :||.            |||..
  Fly   138 SLGGGTGSGMGTLLISKIREEYPDRI----MNTFSVVPSPKV--SDTVVEPYNATLSIHQLVENT 196

Human   149 D----------------TLRLVCSSPSPAEVRWF-----------------FNGDALPVAVRL-- 178
            |                ||:|  |||:..::...                 .|.|...:||.:  
  Fly   197 DDTFCIDNEALYDICFRTLKL--SSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259

Human   179 ---------GMSPDGRMLTRHGVRREEAGAYQCEVWNPVSVSRSEPLNLTVYFGPERVAILQDS- 233
                     |.:|    ||..|.::..|                    |||   ||....:.|: 
  Fly   260 FPRLHFFMPGFAP----LTAKGSQQYRA--------------------LTV---PELTQQMFDAK 297

Human   234 TTRTGCTIKVDFNMSLTLWCVARSCPEPEYVWAFNGK-ALKN-GQDHLNISSMTAAHEGTYTCIA 296
            ...|.|    |......|.|.|          .|.|. ::|. .|..|||.|..:::...:  |.
  Fly   298 NMMTAC----DPRHGRYLTCAA----------IFRGSMSMKEVDQQMLNIQSKYSSYFVEW--IP 346

Human   297 KNSKTLLSGSASVVVKLSA 315
            .|.|..:...|...:|:||
  Fly   347 NNVKVAVCDIAPRGLKMSA 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMTC3NP_861448.2 TMTC_DUF1736 258..331 CDD:462468 15/60 (25%)
TPR 439..668 CDD:440225
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 446..479
TPR repeat 446..474 CDD:276809
TPR repeat 479..523 CDD:276809
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 480..513
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 529..562
TPR repeat 530..557 CDD:276809
TPR repeat 562..592 CDD:276809
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 563..596
LapB 566..802 CDD:442196
TPR repeat 597..625 CDD:276809
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 668..701
TPR repeat 668..696 CDD:276809
TPR repeat 701..731 CDD:276809
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 702..735
TPR repeat 736..765 CDD:276809
TPR 8. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 737..770
TPR 9. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 771..804
TPR repeat 771..799 CDD:276809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 847..891
Spag1NP_651514.1 NlpI <229..373 CDD:443815 37/180 (21%)
TPR repeat 229..257 CDD:276809 4/27 (15%)
TPR repeat 262..293 CDD:276809 11/57 (19%)
TPR repeat 298..326 CDD:276809 9/41 (22%)
Blue background indicates that the domain is not in the aligned region.

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