DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMTC2 and Tmtc2

DIOPT Version :10

Sequence 1:NP_689801.1 Gene:TMTC2 / 160335 HGNCID:25440 Length:836 Species:Homo sapiens
Sequence 2:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster


Alignment Length:921 Identity:340/921 - (36%)
Similarity:482/921 - (52%) Gaps:126/921 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     5 LVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLC 69
            |...:|...||||||.|.|.|||.|||..|.|:...|||...|.||||||.||.||||.|:||||
  Fly    36 LFCCSLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLC 100

Human    70 TLSFRLNHAI-GGLNPWSYHLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAV 133
            .||||||:.| ||..||.:||||.|||...|.|....::.||...:....||.:||:||||||||
  Fly   101 VLSFRLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAV 165

Human   134 AGIVGRADVGASLFFLLSLLCYIKHCSTR-GYSARTWGWFLGSGL-CAGCSMLWKEQGVTVLAVS 196
            ||:|||||:.|.:.:||:.|.|::|...| ....|.| ..||:.| .|...:|.||..:|.|.|.
  Fly   166 AGVVGRADLAACVCYLLTYLSYLRHMRWRESGDPRQW-LALGATLILAAAGLLCKETAITALLVC 229

Human   197 AVYDVFVFHRLKIKQILPTIYKRKNLSLFLSISLLIFWGSSLLGARLYWMGNKPPSFSNSDNPAA 261
            |::||       ::.:...:.|::..|:.:.:..|.    .:...||..:.....:||::|||.|
  Fly   230 ALFDV-------MRGLSGQVDKQRLRSVCIVLGALF----CMAYCRLVIVPGPQTAFSSADNPIA 283

Human   262 DSDSLLTRTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYTGLL----- 321
            .:.|..||.|||.|||..||.|||.|:.|||||.|||:|.:.::.|.||..:..||:.|:     
  Fly   284 RTPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYSVLVGVAWG 348

Human   322 ----LL----------------------------------------------AYYGLKSPSVD-R 335
                ||                                              ||:..:..::. |
  Fly   349 SCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYHQQQQEALPCR 413

Human   336 ECNGKTVTNGKQNANGH------------------------------SC-----LSDVEYQNSET 365
            :||       ..|::|:                              ||     .|.....:|.:
  Fly   414 DCN-------NNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSSSS 471

Human   366 KSSFASKVENGIK---NDVSQRTQLPSTEN--IVVLSLSLLIIPFVPATNLFFYVGFVIAERVLY 425
            .||.:|.:..|.:   .|.:.....|:..:  ::::|||.|.:||:||:||.||||||:|||:||
  Fly   472 SSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERLLY 536

Human   426 IPSMGFCLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKV 490
            :||:|||||:..|...|....|:  .::::..:.:.|:....|:|..||.||::||.||||.|.:
  Fly   537 LPSVGFCLLVGYGVSKLMSCNQR--TRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAI 599

Human   491 NPAKAWGNLGNVLKSQSKISEAESAYRNALYYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIG 555
            ||.||.||||:||.||.:..||:...:.|:.:|.||||:.:|||:|.|....:..|:..::.||.
  Fly   600 NPPKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIK 664

Human   556 SRPTLASAYLNTGIILMNQGRTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQG 620
            .||.||.||||.||..:..|:.::|.......|.:....::|..||..:.:|....||.||.|||
  Fly   665 FRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQG 729

Human   621 HYEEALSVYKEAIQKMPRQFAPQS---LYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLT 682
            ..:.||::|:||:..:|.  .||.   ||..:|:...||.:..|||..:..:|..:.:.:.|||:
  Fly   730 KLQRALAIYREALSSLPG--LPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLS 792

Human   683 YGKLLAL-TGRKSEAEKLFLKAIELDPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFD 746
            ||..||. :.|.||||..|.:|::|.|.:.:.|.||.:||..::|..|:|...::||||...::.
  Fly   793 YGITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYT 857

Human   747 VVFNAAHMLRQASLNEAAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLKPD 811
            :|..||..:|.......||.:|..|..|||....|..||||||||.||...|.|:|..||:|:|.
  Fly   858 LVVAAATAMRLLDRKVDAEMWYRKAVALRPGDAHAHTNLGAILHLLGRTNHAAASYKAALRLQPG 922

Human   812 DVITQSNLRKL 822
            |.||..||.||
  Fly   923 DAITLGNLAKL 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMTC2NP_689801.1 ArnT <78..>198 CDD:441412 54/122 (44%)
TMTC_DUF1736 247..318 CDD:462468 34/70 (49%)
TPR 488..727 CDD:440225 91/242 (38%)
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 493..526 14/32 (44%)
TPR repeat 493..521 CDD:276809 13/27 (48%)
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 527..560 12/32 (38%)
TPR repeat 527..555 CDD:276809 9/27 (33%)
TPR repeat 560..590 CDD:276809 11/29 (38%)
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 561..594 10/32 (31%)
TPR repeat 595..634 CDD:276809 16/38 (42%)
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 606..639 14/32 (44%)
TPR repeat 642..671 CDD:276809 10/31 (32%)
TPR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 643..676 10/35 (29%)
TPR 646..>819 CDD:440225 68/173 (39%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 677..710 16/33 (48%)
TPR repeat 679..705 CDD:276809 14/26 (54%)
TPR repeat 710..774 CDD:276809 20/63 (32%)
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 711..744 12/32 (38%)
TPR 8. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 745..778 11/32 (34%)
TPR 9. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 779..812 18/32 (56%)
TPR repeat 779..807 CDD:276809 15/27 (56%)
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468 35/72 (49%)
TPR 597..852 CDD:440225 97/256 (38%)
TPR repeat 602..630 CDD:276809 13/27 (48%)
TPR repeat 635..665 CDD:276809 11/29 (38%)
TPR repeat 670..694 CDD:276809 9/23 (39%)
TPR repeat 715..743 CDD:276809 13/27 (48%)
TPR repeat 748..782 CDD:276809 11/33 (33%)
TPR 780..>933 CDD:440225 63/152 (41%)
TPR repeat 787..816 CDD:276809 14/28 (50%)
TPR repeat 822..850 CDD:276809 9/27 (33%)
TPR repeat 855..885 CDD:276809 8/29 (28%)
TPR repeat 890..918 CDD:276809 15/27 (56%)

Return to query results.
Submit another query.