DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and Sgsh

DIOPT Version :9

Sequence 1:XP_006527908.1 Gene:Ids / 15931 MGIID:96417 Length:595 Species:Mus musculus
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:610 Identity:127/610 - (20%)
Similarity:219/610 - (35%) Gaps:222/610 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse    40 NILLIIVDDLRPSLGCYGDKLVRSPNIDQLASHSVLFQNAFAQQAVCAPSRVSFLTGRRPDTTRL 104
            |:||::.||.....|.|.:|..::||:|.||...:||.|||...:.|:|||...|||:...::.:
  Fly    22 NVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTGQAGHSSGM 86

Mouse   105 YDFNSYWRVHSG--NFSTIPQYFKENGYV-----TMSVGKVF-------HPGISSNHSDDYPYSW 155
            |.      :|.|  ||:.:|    :.|.:     ..|.|::.       |.|.::|...|:..: 
  Fly    87 YG------LHQGVHNFNVLP----DTGSLPNLIRDQSGGRILSGIIGKKHVGAANNFRFDFEQT- 140

Mouse   156 SFPPYHPSSEKYENTKTCKGQDGKLHANLLCPVDVADVPEGTLPDKQSTEEAIRLLEKMKTSASP 220
              ...|..::...|....|                              |.|.:.|::.|....|
  Fly   141 --EEQHSINQIGRNITRMK------------------------------EYARQFLKQAKDEKKP 173

Mouse   221 FFLAVGYHKPHIPFRYPKEFQKLYPL-----ENITLAPDPHVPDSLPPVAYNPWMDIREREDVQA 280
            |||.||:|.||.......:|.:....     |.:...||      ..|:.|: |.          
  Fly   174 FFLMVGFHDPHRCGHITPQFGEFCERWGSGEEGMGSIPD------WKPIYYD-WR---------- 221

Mouse   281 LNISVPYGPIPEDFQHRCSICSILILRQSSCESSWKEHLLLLSRGFQLP-SEVLCLFAERKIRQS 344
             |:.||                           :|            || ::|:     |:...:
  Fly   222 -NLDVP---------------------------AW------------LPDTDVV-----RQELAA 241

Mouse   345 YFASVSYLDTQVGHVLSALDDLRLAHNTIIAFTSDHG-------WALGEHGEWAKYSNFDVATRV 402
            .:.::|.||..||.:|..|:...:|..|::.:|||:|       ..|.|||           .|.
  Fly   242 QYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGPPFPGGRTNLYEHG-----------IRS 295

Mouse   403 PLMLYVPGRTAPLPAAGQKLFPYRDPFDPASDWMDAGRH---TEDLVELVSLFPTLAGLAGLPVP 464
            ||::..|.:                          ..||   |..:|.|:.::|::.....:|.|
  Fly   296 PLIISSPNK--------------------------EDRHHEATAAMVSLLDIYPSVMDALQIPRP 334

Mouse   465 PRCPIPSFHVELCREGQNLQKHLQLHDLEEEP------DLFGN----------PRELIAYSQYPR 513
            ....|         .|:::     |..|.|||      .:||:          |..::...:|..
  Fly   335 NDTKI---------VGRSI-----LPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKL 385

Mouse   514 PADFPQWNSDKPSLNDI-------KVMGYSIR--TVDYRYTVWVGFDPSEFLANFSDIHAGELYF 569
            ..:...| :|.|...|.       :::..::|  |:.:..::...:...|:          |||.
  Fly   386 IHNINYW-ADFPIDQDFYTSPTFQQILNATLRKQTLPWYRSLLQYYQRPEW----------ELYD 439

Mouse   570 VDSDPLQDHNVYNDSQHGGLLHSLR 594
            :.:|||:..|:.:.:::.|.|..||
  Fly   440 IKTDPLERFNLADKAKYNGTLKQLR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsXP_006527908.1 iduronate-2-sulfatase 40..586 CDD:293754 123/600 (21%)
SgshNP_650760.1 AslA 17..476 CDD:225661 127/610 (21%)
SGSH 22..471 CDD:293751 127/610 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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