DRSC/TRiP Functional Genomics Resources

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Protein Alignment NKX2-3 and nkx2-3

DIOPT Version :10

Sequence 1:NP_660328.2 Gene:NKX2-3 / 159296 HGNCID:7836 Length:364 Species:Homo sapiens
Sequence 2:XP_002937234.1 Gene:nkx2-3 / 100486189 XenbaseID:XB-GENE-852996 Length:328 Species:Xenopus tropicalis


Alignment Length:380 Identity:211/380 - (55%)
Similarity:241/380 - (63%) Gaps:68/380 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     1 MMLPSPVTSTPFSVKDILNLEQQ------H-QHF-------HGAHLQADLEHHFHSAPCMLAAAE 51
            |||||||||||||||||||||||      | ||.       |.||...||:..|..|.|||||.|
 Frog     1 MMLPSPVTSTPFSVKDILNLEQQGQPPIAHPQHLQQQCSRAHPAHPAQDLDSDFQQASCMLAAGE 65

Human    52 GTQFSDGGEEDEEDEGEKLSYLNSLAAADGHGDSGLCPQGYVHTVLRDSCSEPKEH-EEEPEVVR 115
            ...:: |||       :||.:|:::.||:.|||.||.|..||  .|||    |||. |||.:.:|
 Frog    66 RCVYA-GGE-------DKLPFLSAMGAAEPHGDVGLSPDRYV--ALRD----PKEEDEEEEDSLR 116

Human   116 DRSQKSCQLKKSLETAGDCKAAEESERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREH 180
            :...|||.|.||.:..|   ..|:.:|||.|||||||||||||||||||||||||||||||||||
 Frog   117 EGGNKSCFLNKSPDGEG---KLEDPDRPKQRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREH 178

Human   181 LASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGAHAPPPPPRRVAVPVLVRDGKPCVTPSAQA 245
            ||:||||||||||||||||||||||||||||||:|.| .|||||||||||||||||||:..| |:
 Frog   179 LANSLKLTSTQVKIWFQNRRYKCKRQRQDKSLEMGTH-HPPPPRRVAVPVLVRDGKPCIGGS-QS 241

Human   246 YGAPYSVGASAYSYNSFPAYGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTSAAT 310
            |...|:|.||.|||||:|||.|.||              .:|:::|.|.|               
 Frog   242 YNTAYNVTASPYSYNSYPAYSYNNS--------------PSYNTNYNCNY--------------- 277

Human   311 TAMQPACSAAGGGPFVNVSNLGGFGSGGSAQP-LHQGTAAGAACAQGTLQGIRAW 364
            .::.......|..||||:.||....:  |.|| .|.||:. .|| ||||||||||
 Frog   278 ASIPSNLHNTGTSPFVNLGNLSQISN--SPQPQTHPGTSV-PAC-QGTLQGIRAW 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKX2-3NP_660328.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..153 11/20 (55%)
Homeodomain 149..205 CDD:459649 54/55 (98%)
nkx2-3XP_002937234.1 Homeodomain 147..203 CDD:459649 54/55 (98%)

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