DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYP3A4 and Cyp28d2

DIOPT Version :9

Sequence 1:NP_059488.2 Gene:CYP3A4 / 1576 HGNCID:2637 Length:503 Species:Homo sapiens
Sequence 2:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster


Alignment Length:497 Identity:139/497 - (27%)
Similarity:239/497 - (48%) Gaps:61/497 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    11 TWLLLAVS-LVLLYLYGTHSHGLFKKLGIPGPTPLPFLGNILSY--HKGFCMFDM-ECHKKY--- 68
            |:|:|.:: |||:|::.|.:...::|.||......||:|:..|.  .|....:|: :.::||   
  Fly     6 TFLVLVLTLLVLVYVFLTWNFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDIYEKYKDT 70

Human    69 GKVWGFYDGQQPVLAITDPDMIKTVLVKECYSV-------FTNRR--------PFGPVGFMKSAI 118
            ..:.|.:..:.|.|.:..|:.|..:...:..|.       |.|::        ||          
  Fly    71 DNMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGNNPF---------- 125

Human   119 SIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAE--TGKPVTLKDVFGAYSM 181
             :...:|||..||.:.|..:..::|.:.|:........|..:||:.:  |.:.:...|:...|:.
  Fly   126 -VLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEGLDAMDLSLCYTT 189

Human   182 DVITSTSFGVNIDSLNNPQDPFVENTKKLLR--FDFLDPFFLSITVFPFLIPILEVLNICVFPRE 244
            :|::....||:..|..:...|.::..|::..  |:|:   |.|: |......:.:..::..|.:|
  Fly   190 EVVSDCGLGVSAQSFTDTPTPLLKMIKRVFNTSFEFI---FYSV-VTNLWQKVRKFYSVPFFNKE 250

Human   245 VTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYET 309
            ...|....::|....|||..::.|.|||..|:..|..      |.|....::..::.||..|:||
  Fly   251 TEVFFLDIIRRCITLRLEKPEQQRDDFLNYMLQLQEK------KGLHTDNILINTMTFILDGFET 309

Human   310 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLE 374
            |:.||:.||..|..:|:.|.|:::||     ..|..|:|.:.::.:||..:.||||||...:...
  Fly   310 TALVLAHIMLMLGRNPEEQDKVRKEI-----GSADLTFDQMSELPHLDACIYETLRLFSPQVAAR 369

Human   375 RVCKKDVEI---NG--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPY---- 430
            ::..:..|.   ||  :.:..|.||.||..|||.||:|:.:|..|.||||.:.|...:..|    
  Fly   370 KLVTEPFEFANKNGRTVHLKPGDVVTIPVKALHHDPQYYEDPLTFKPERFLESNGGGMKSYRDRG 434

Human   431 IYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ 472
            :|..||.|||:|.||||||..:|.||:.:|:||..|...:|:
  Fly   435 VYLAFGDGPRHCPGMRFALTQLKAALVEILRNFEIKVNPKTR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYP3A4NP_059488.2 p450 39..493 CDD:365848 128/468 (27%)
Cyp28d2NP_608911.1 p450 38..475 CDD:299894 127/462 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.920

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