DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYP2C8 and spo

DIOPT Version :9

Sequence 1:NP_000761.3 Gene:CYP2C8 / 1558 HGNCID:2622 Length:490 Species:Homo sapiens
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:514 Identity:148/514 - (28%)
Similarity:235/514 - (45%) Gaps:96/514 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    31 PGPTPLPIIGNMLQID-VKDI-CKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEE 93
            |||.|.|||||:..:| .:|. ...||..::.||.::::.||....:|.:..|.::|.|..||:.
  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKV 120

Human    94 FSGRGNSPISQRITKGLGIISSNGKR---WKEI--------------RRFSLTTLRNFGMGKRSI 141
            .|||   |...|..|..|...||...   |.::              |.||...::...:|...:
  Fly   121 MSGR---PDFIRYHKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEM 182

Human   142 EDRVQEEAHCLVEELRKTKASPCD--PTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNEN 204
            |...:|..:.||      ...|.:  |..:..||  |:....:...||||.|.:|..:::.|:|.
  Fly   183 EHWNRELGNQLV------PGEPINIKPLILKACA--NMFSQYMCSLRFDYDDVDFQQIVQYFDEI 239

Human   205 FRILNS-------PWIQVCNNFPLLIDCFPGTH-NKVLKNVALTRSYIREKVKEH-QASLDVNNP 260
            |..:|.       ||:     :|     |...| ||::...:..|.:|.|::..| :.|:|::.|
  Fly   240 FWEINQGHPLDFLPWL-----YP-----FYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEP 294

Human   261 -RDFIDCFLIKMEQEKDNQKSE--FNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAK 322
             |||.|..|..:.::||..::.  |.:|:        |:.|.......:...|..:.|:.::..:
  Fly   295 DRDFTDALLKSLLEDKDVSRNTIIFMLED--------FIGGHSAVGNLVMLVLAYIAKNVDIGRR 351

Human   323 VQEEIDHVI-GRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTT 386
            :|||||.:| ..:||..:.|.:.||||.|.:.|:.|||. .|. |||..|.||....|.:.|| |
  Fly   352 IQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKG-T 413

Human   387 IMALLTSVLHDDKEF-PNPNIFDPGHFLDKN-----GNFKKSD-----------------YFMPF 428
            |:.:...||:..::| .||..|:|..||:.:     .|.|.||                 :|:||
  Fly   414 IVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPF 478

Human   429 SAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIVSLPPSYQICF 487
            |.|||.|.|:.|.|...||.:..::|.:|:.|    .|.:|..::...::||..   ||
  Fly   479 SIGKRTCIGQNLVRGFGFLVVVNVMQRYNISS----HNPSTIKISPESLALPAD---CF 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYP2C8NP_000761.3 p450 30..487 CDD:278495 146/512 (29%)
spoNP_001286943.1 p450 56..540 CDD:299894 148/514 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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