DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hspa4 and Hsc70Cb

DIOPT Version :9

Sequence 1:NP_032326.3 Gene:Hspa4 / 15525 MGIID:1342292 Length:842 Species:Mus musculus
Sequence 2:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster


Alignment Length:872 Identity:383/872 - (43%)
Similarity:532/872 - (61%) Gaps:66/872 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACVSFGPKNRSIGAAAKSQVISNAKNTVQ 65
            |||:|||.|.:|||||.||:|||||:||:||.|.||:.|:|..|.|.||.|||:|.::|.||||.
  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65

Mouse    66 GFKRFHGRAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVTYMEEERNFTTEQVTAMLLSKLKETAE 130
            ||||..||.|:||.|:.|.:::...:.....|..||||.|:.|:::|..||:||||.:|||||:.
  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130

Mouse   131 SVLKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKP 195
            :.::..|.|||::.|.|:|:|||::::||.||||||.|||||||||.|||||.||.||  .|:||
  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDL--FEDKP 193

Mouse   196 RNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKI 260
            |||:|||.|||:.|.|.|||.|||||:||:.:| .:|||..|..|.::|.:||.::||::.|:..
  Fly   194 RNVIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNA 257

Mouse   261 RALLRLSQECEKLKKLMSANASDLPLSIECFMNDIDVSGTMNRGKFLEMCDDLLARVEPPLRSVL 325
            ||.|||..|.|||||.||||::.|||:||||::|||||.:|.|.:..|:|..:|.|||...:.:|
  Fly   258 RANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLL 322

Mouse   326 EQSKLKKEDIYAVEIVGGATRIPAVKEKISKFFGKELSTTLNADEAVTRGCALQCAILSPAFKVR 390
            .:|||:.:||::||||||::|||:||:.|.:.|.|..|||||.||||:||.||||||:|||.:||
  Fly   323 AESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNKPASTTLNQDEAVSRGAALQCAIMSPAVRVR 387

Mouse   391 EFSITDVVPYPISLRWNSPAEEGLSDCEVFPKNHAAPFSKVLTFYRKEPFTLEAYYSSPQDLPYP 455
            ||.:||:..|.:.:.|:|.......:.|:||:.||:|||::||..||.||.:...|.  |.:|||
  Fly   388 EFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIVYG--QQVPYP 450

Mouse   456 DPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSAALVEVHKSEESEEPMETDQNAKEEE 520
            |..|..:.|:.|.|...|....||:|||:|.:||..:|||.|||   .:|:||.....:.|..||
  Fly   451 DQTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVE---KKEAEEAAAAAEQAASEE 512

Mouse   521 KMQVDQEEPHTEEQQQQPQTPAENKAESEEMETSQAGSK--------------DKKTDQPPQAKK 571
            | ..||.....|....|.:...||:.::.....|..|.:              |||       ||
  Fly   513 K-PGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKK-------KK 569

Mouse   572 AKVKTSTVDLPIE--SQLLWQLDREMLGLYTENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKL 634
            |...|   :||:|  :.....:|   |..||:.|.|||..|:.|.||.|||||:||:||:||:||
  Fly   570 ASKAT---ELPLECTTHGFSPVD---LSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKL 628

Mouse   635 -SGEYEKFVSEDDRNTFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKSLGQPIKTRFQESEERP 698
             .|.:|::|.|.:|.....:|.|.||||||||||..:.:|..:|..|.....|||.|..:.|:.|
  Fly   629 QGGPFERYVVEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLRASDYEQGP 693

Mouse   699 KLFEELGKQIQQYMKVISSFKNKEDQYEHLDAADVTKVEKSTNEAMEWMNSKLNLQNKQSLTVDP 763
            ..|:||...|......::.|:....:|:||...:...:.::.::|..|:::.|....:...|.|.
  Fly   694 AAFDELKNSIAIARLAVAEFRKGVPKYDHLTETEFINISETADKAQSWLDANLPKFTQSPRTADS 758

Mouse   764 VVKTKEIEAKIKELTSICSPIISKPKPK------VEPPKEEPKHAEQNG--PVDGQG-----DNP 815
            .|:...:..:::.|.|..|.:|::.|||      ..|||:| .:|||||  |....|     ||.
  Fly   759 PVQISAVRQEVQTLNSCVSSVINRAKPKPTPAKTATPPKDE-ANAEQNGGEPAANSGDKMDVDNN 822

Mouse   816 GSQAAEHGADTAVPSDGDKKLPEMDID 842
            |..||  |.|           |.|:::
  Fly   823 GQSAA--GND-----------PSMEVE 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hspa4NP_032326.3 HSPA4_NBD 2..384 CDD:212687 214/381 (56%)
HSP70 3..609 CDD:278441 297/621 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..577 21/90 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 784..842 24/70 (34%)
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 214/381 (56%)
HSP70 3..682 CDD:278441 334/700 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847003
Domainoid 1 1.000 624 1.000 Domainoid score I178
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1624
Inparanoid 1 1.050 678 1.000 Inparanoid score I718
Isobase 1 0.950 - 0 Normalized mean entropy S1071
OMA 1 1.010 - - QHG54058
OrthoDB 1 1.010 - - D285748at33208
OrthoFinder 1 1.000 - - FOG0001023
OrthoInspector 1 1.000 - - otm42371
orthoMCL 1 0.900 - - OOG6_100680
Panther 1 1.100 - - LDO PTHR45639
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R574
SonicParanoid 1 1.000 - - X684
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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