DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADRB3 and adrb2

DIOPT Version :9

Sequence 1:NP_000016.1 Gene:ADRB3 / 155 HGNCID:288 Length:408 Species:Homo sapiens
Sequence 2:NP_001116897.2 Gene:adrb2 / 100144654 XenbaseID:XB-GENE-494302 Length:419 Species:Xenopus tropicalis


Alignment Length:407 Identity:179/407 - (43%)
Similarity:239/407 - (58%) Gaps:44/407 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     5 PHENSSLAPWPDLPTLAPNTANTSGLPGVPWEAALAGALLALAVLATVGGNLLVIVAIAWTPRLQ 69
            |:.||:|   ..|.:...||:|.|..||..|...: |.:::..||..|.||:|||.|||...|||
 Frog     9 PYPNSTL---EQLVSNVSNTSNASDKPGDAWMVGM-GIIMSCIVLVIVLGNVLVITAIAKFQRLQ 69

Human    70 TMTNVFVTSLAAADLVMGLLVVPPAATLALTGHWPLGATGCELWTSVDVLCVTASIETLCALAVD 134
            |:||.|:||||.|||:|||:|||..|:..:...|......||.|||||:|||||||||||.:|||
 Frog    70 TVTNYFITSLACADLLMGLIVVPFGASSIILDTWVFNNFWCEFWTSVDILCVTASIETLCVIAVD 134

Human   135 RYLAVTNPLRYGALVTKRCARTAVVLVWVVSAAVSFAPIMSQWWRVGADAEAQRCHSNPRCCAFA 199
            ||.|:|:|.||.:|:||..||..::||||||...||.||...|:|: .:..|..|:.:|.||.|.
 Frog   135 RYFAITSPFRYQSLLTKCKARIVILLVWVVSTLTSFLPIYMHWYRI-EEESALHCYDDPSCCFFF 198

Human   200 SNMPYVLLSSSVSFYLPLLVMLFVYARVFVVATRQLRLLRGELGRFPPEESPPAPSRSLAPAPVG 264
            :|..|.:.||.:||||||:||:|||||||..|.:||:.:....|||..:.:....:...      
 Frog   199 TNPAYAISSSIISFYLPLVVMIFVYARVFQEAKKQLKKIDKSEGRFHNQNNQQDTNGKQ------ 257

Human   265 TCAPPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLANVLRALGGPSLVPGPAFL 329
                       |.:......|:||:||.|||:|||||||||||||:.|:::.: ....:|...:.
 Frog   258 -----------GNKRTSKFWLKEHKALKTLGIIMGTFTLCWLPFFIVNIVQVM-HKDFIPVKVYN 310

Human   330 ALNWLGYANSAFNPLIYCRSPDFRSAFRRLLCRCGRRLPPEPCAAARPALFPSGVPAARSSPA-- 392
            .|||:||.||||||||||||||||..|:.|||.      .:|.:.|    :.:|.|.:..:.|  
 Frog   311 FLNWVGYVNSAFNPLIYCRSPDFRYTFQELLCL------RKPGSKA----YANGYPQSNGNSAYN 365

Human   393 ---------QPRLCQRL 400
                     :.|.|:.|
 Frog   366 EDTEPCQYSKDRTCEVL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRB3NP_000016.1 7tm_GPCRs 51..356 CDD:333717 152/304 (50%)
TM helix 2 73..95 CDD:320095 15/21 (71%)
TM helix 3 111..133 CDD:320095 17/21 (81%)
TM helix 4 156..172 CDD:320095 8/15 (53%)
TM helix 5 202..225 CDD:320095 13/22 (59%)
TM helix 6 288..313 CDD:320095 19/24 (79%)
TM helix 7 325..350 CDD:320095 16/24 (67%)
adrb2NP_001116897.2 7tmA_Beta2_AR 38..337 CDD:341355 155/318 (49%)
TM helix 1 39..65 CDD:341355 12/26 (46%)
TM helix 2 72..99 CDD:341355 17/26 (65%)
TM helix 3 110..140 CDD:341355 24/29 (83%)
TM helix 4 152..175 CDD:341355 12/22 (55%)
TM helix 5 200..232 CDD:341355 20/31 (65%)
TM helix 6 267..297 CDD:341355 22/29 (76%)
TM helix 7 306..331 CDD:341355 16/24 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276672at33208
OrthoFinder 1 1.000 - - FOG0002077
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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