DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsd3b1 and CG8306

DIOPT Version :9

Sequence 1:NP_001291729.1 Gene:Hsd3b1 / 15492 MGIID:96233 Length:373 Species:Mus musculus
Sequence 2:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster


Alignment Length:510 Identity:107/510 - (20%)
Similarity:180/510 - (35%) Gaps:199/510 - (39%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 AGWSCLVTGAGGFVGQRIIKMLVQE----------------KELQEVRALDKVFRPETKEEFSKL 50
            ||.:..:|||.||||..|::.|:::                |.:||  .|:::.:....::|.:|
  Fly    11 AGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQE--RLEELKKNSVFDKFKEL 73

Mouse    51 QTK---TKVTVLEGDI---------LDAQCLRRACQGISVVIHTAAVIDVTGVIPRQTILDVNLK 103
            |.:   :|:..:|||:         .|.|.|   ...::||.|:||.:|....:...|  ::||:
  Fly    74 QLQSRLSKIVPIEGDVGLEHLGISPKDRQTL---IDNVNVVFHSAATLDFFQSLKETT--NINLR 133

Mouse   104 GTQNLLEACVQ-ASVPAFIFCSSVDV------------AGPNSYKKIV-------------LNGH 142
            ||:.::|.|.| .::.|.:..||..|            ..|...:||:             |...
  Fly   134 GTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPK 198

Mouse   143 EEQNHESTWSDPYPYSKKMAEKAVLAAN-----------GSML--------------KNG----- 177
            ..::|.:|    |.::|.:||..|  ||           .||:              |||     
  Fly   199 LLKDHPNT----YTFTKHLAEHEV--ANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFF 257

Mouse   178 -----GTLNTCALRPMYIYGERSPF--IFNAIIRALKNKGILCVTGKFSIANPVYVEN------V 229
                 |.|....|.|..|. :..|.  :.|.||          .||.:  .|.:..:|      :
  Fly   258 MGASKGVLRRLPLDPSIIM-DYIPIDVVVNGII----------TTGYY--VNSLQAKNGGRPADL 309

Mouse   230 AWAHILAARGLRDPKKSTSIQGQFYYISDDTPHQSYDDLNYTLSKEWGLRPNASW--SLPLPLLY 292
            ...|:.:         ||....:|..::|......:|   |.|:       :|.|  :|.|....
  Fly   310 QIFHLTS---------STYKPFRFELMTDKINSYLHD---YPLN-------SAVWYPNLRLVKSL 355

Mouse   293 WLAFLLETVSF---------LLRPVYRYRPLF-------------------------NRHLITLS 323
            |: |.|..:.|         |:..:...||:.                         ::.|:.||
  Fly   356 WV-FRLSAILFHFIPAIILDLVTKIGGGRPILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALS 419

Mouse   324 NSTFTFSYKKAQRDLG--------------------YEPLVNWEEAKQKTSEWIG 358
            .:......||...|:|                    .||:.|.|:|::|....:|
  Fly   420 KTLNIVDKKKFFIDIGELAWDEYFSNTILGVRQYLSKEPIKNLEKARRKDKILLG 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsd3b1NP_001291729.1 NADB_Rossmann 5..357 CDD:389744 104/504 (21%)
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 100/490 (20%)
FAR-N_SDR_e 13..339 CDD:187547 78/363 (21%)
FAR_C 364..454 CDD:176924 11/89 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3985
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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