DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CYP1A2 and spo

DIOPT Version :9

Sequence 1:NP_000752.2 Gene:CYP1A2 / 1544 HGNCID:2596 Length:516 Species:Homo sapiens
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:534 Identity:143/534 - (26%)
Similarity:231/534 - (43%) Gaps:90/534 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    15 LLASAIFCLVFWVLKGLRPRVPKGLKS----------------PPEPWGWPLLGHVLTLGK---N 60
            :||::..|:::    |::.||.:.:|:                .|.|..||::|::..|.:   :
  Fly    16 VLATSYICIIY----GVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDRYRDS 76

Human    61 PHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQ---S 122
            |....:.::|:|||:..:..|.|..||::.|:.||:.|.:.|....||||......:..|:   |
  Fly    77 PFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGERSNS 141

Human   123 LTFSTDSGPVWAARRRLAQN--ALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGH 185
            |.. .|...:...||.||:.  :...||......|...|...||.::|..      .:|:.|   
  Fly   142 LAL-CDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELG------NQLVPG--- 196

Human   186 FDPYN---QVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN 247
             :|.|   .::.:.||:.........|.....:...:|:...|.....:.|:||||.|.|    .
  Fly   197 -EPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFLPWL----Y 256

Human   248 PALQRFKAFNQRFLW------FLQKTVQEHYQ---DFDKNSVRDITGALFKHSKKGPRASGNLIP 303
            |..||.  .|:...|      |:.:.:..|.:   |.|:.. ||.|.||.|...:....|.|   
  Fly   257 PFYQRH--LNKIINWSSTIRGFIMERIIRHRELSVDLDEPD-RDFTDALLKSLLEDKDVSRN--- 315

Human   304 QEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRP-RLSDRPQLPY 367
              .|:.::.|..| |...|...:...|.|:....:|.|:||:|:|.:|..|.|. .|.|...:||
  Fly   316 --TIIFMLEDFIG-GHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPY 377

Human   368 LEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF 432
            ..|.|.|..|:|| .|. :||..|.||.::|:.:.|...||:|.:.:|...:.|.:|.||.|.||
  Fly   378 TMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRF 440

Human   433 L-----------TADGTAINKPLSEKMML---------FGMGKRRCIGEVLAKWEIFLFLAILLQ 477
            |           ....:.|... :||:.|         |.:|||.|||:.|.:...||.:..::|
  Fly   441 LEPSKEQSPKNSKGSDSGIESD-NEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQ 504

Human   478 QLEFSV--PPGVKV 489
            :...|.  |..:|:
  Fly   505 RYNISSHNPSTIKI 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYP1A2NP_000752.2 p450 42..500 CDD:365848 136/491 (28%)
spoNP_001286943.1 p450 56..540 CDD:299894 136/490 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.