Protein Alignment Hoxd4 and Ubx

DIOPT Version :9

• Sequence 1: NP_034599.2
• Gene: Hoxd4 / 15436
• MGIID: 96208
• Length: 250
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 258
• Identity: 83/258 - (32%)
• Similarity: 111/258 - (43%)
• Gaps: 82/258 - (31%)

Mouse    26 GGYLGEQGAD--YYGSGAQGADFQPSGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSH 88
            ||||...|..  .:..|:.|.:...||       |....||...|.|.|           |.|:.
  Fly   165 GGYLDTSGGSPVSHRGGSAGGNVSVSG-------GNGNAGGVQSGVGVA-----------GAGTA 211

Mouse    89 YGAPGERCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPA--VVYPWM------------KKVH 139
            :.|   .|      .:.||.|        |....::|.|.:  ..||||            .|:.
  Fly   212 WNA---NC------TISGAAA--------QTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIR 259

Mouse   140 ---------------------VNSVNPNY--TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 181
                                 ..|:.|::  |.|..:|.|..|||.|.||||||||.|.||||||
  Fly   260 SDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 324

Mouse   182 RIEIAHTLCLSERQIKIWFQNRRMKWKKD--------HKLPNTKGRSSSSSSCSSSAAPGQHL 236
            |||:||.|||:||||||||||||||.||:        .:....:.:.:::::.:::|..|.||
  Fly   325 RIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQGGHL 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxd4	NP_034599.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	31..126		19/96 (20%)
		Antp-type hexapeptide	131..136		4/16 (25%)
		Homeobox	155..208	CDD:278475	42/52 (81%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..250		4/35 (11%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	42/52 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.810