Protein Alignment Hoxd10 and Abd-B

DIOPT Version :10

• Sequence 1: XP_006498852.1
• Gene: Hoxd10 / 15430
• MGIID: 96202
• Length: 410
• Species: Mus musculus
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 361
• Identity: 98/361 - (27%)
• Similarity: 143/361 - (39%)
• Gaps: 77/361 - (21%)

Mouse    52 PSDVSLQRTQSL---FFKFLPKMSFPNSSPAANTFLVDSLISACRSDSFYSSSASMYMPPPSADM 113
            |:..|.|:.|.|   ..:.||:...|||            :::..|.:.................
  Fly   148 PTGPSAQQQQHLTSPHHQQLPQQQTPNS------------VASGASSNLQQQQQQQNAAVAPGQT 200

Mouse   114 GTYGMQTCGLLPSLAKREVNHQNMGMNVHP-YIPQVDSW----TDPNRSCRIEQPVTQQVPTCSF 173
            ......|..:.||....:....||.:.:.| :||.:.:.    ||.
  Fly   201 QIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDT------------------- 246

Mouse   174 TANIKEESNCCMYSDKR-NKLISAEVPSYQRLVPESCPVENPEVPVPGY----FRLSQTYATGKT 233
            :|.:|..:....|:|:. |:...:..  |.|....:.|....:.||..|    :|..||.:....
  Fly   247 SAAVKRHTAHWAYNDEGFNQHYGSGY--YDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAA 309

Mouse   234 QEYNNSPEGSSTVMLQLNPRGAAKPQLSAAQLQMEKKMNESASGQEPTKVSQVESPEAKGGLPED 298
            ..|.|.                |:..:|||..|..:  ..|.|..||...|   ||....|.|.:
  Fly   310 AAYMNE----------------AERHVSAAARQSVE--GTSTSSYEPPTYS---SPGGLRGYPSE 353

Mouse   299 RSCLAEVSVSSPEVQEKESKEEIKSDTPT---SNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMY 360
                   :.||.......|...:...||.   ..|....|.||||.||:|.||||||||||||.|
  Fly   354 -------NYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAY 411

Mouse   361 LTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSR 396
            :::::|.|:::::.||:|||||||||||||.||.|:
  Fly   412 VSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQ 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxd10	XP_006498852.1	Homeodomain	337..393	CDD:459649	37/55 (67%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	37/55 (67%)