DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxd10 and Antp

DIOPT Version :10

Sequence 1:XP_006498852.1 Gene:Hoxd10 / 15430 MGIID:96202 Length:410 Species:Mus musculus
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:330 Identity:93/330 - (28%)
Similarity:142/330 - (43%) Gaps:84/330 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse   104 MYMPP--PSADMGTYGM----QTCGLL------------PSLAKREVNHQNMGMNVHPYIPQV-D 149
            :|..|  ||:.:|  |:    ||.|.|            ||..:::...|.....:...:||| .
  Fly    82 VYSRPDSPSSQVG--GVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQ 144

Mouse   150 SWTDPNRSCRIEQPVTQQVPTCSFTA------NIKEESNCCMYSDKRNKLISAEVPSYQRLVPES 208
            ..|.|.:  :.:|||.  ..:|...|      .:.|..:..:........::|::.....:....
  Fly   145 QVTHPQQ--QQQQPVV--YASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQ 205

Mouse   209 CPVENPEVPVPGYFRLSQTYAT-GKTQEYNNSPEGSSTVMLQLNPRGAAKPQLSAAQLQMEKKMN 272
            ..:...:|.||....:.|.:.. |..|:.:..|           |.| |.||....|.|...:|:
  Fly   206 AQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVP-----------PVG-APPQGMMHQGQGPPQMH 258

Mouse   273 ESASGQEPTKVSQVESPEAK-GGLPEDRSCLAEVSVSSPEVQEKESKEEIKSDTPTSNWLTAKSG 336
            :...||. |..||  :|.:: .|:|                            :|...|:.::.|
  Fly   259 QGHPGQH-TPPSQ--NPNSQSSGMP----------------------------SPLYPWMRSQFG 292

Mouse   337 ----RKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSR 396
                ||: |..||::|||||||||.||.||||.||:||:.::.||:||:||||||||||.||   
  Fly   293 KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK--- 354

Mouse   397 ENRIR 401
            ||:.:
  Fly   355 ENKTK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxd10XP_006498852.1 Homeodomain 337..393 CDD:459649 38/56 (68%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 34/187 (18%)
Homeodomain 298..354 CDD:459649 37/55 (67%)

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