Protein Alignment Hoxd1 and Antp

DIOPT Version :9

• Sequence 1: NP_034597.2
• Gene: Hoxd1 / 15429
• MGIID: 96201
• Length: 328
• Species: Mus musculus
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 266
• Identity: 78/266 - (29%)
• Similarity: 102/266 - (38%)
• Gaps: 80/266 - (30%)

Mouse    57 LPLATARPTPSPPAGPAQSPVPQPAAPRYAPCTLEGAY-ERGAAPASAAEYGFLGSGPAFD---- 116
            ||..|.:.|  .|....|.||.      ||.|.|:.|. ..|..|..       ||.|..|
  Fly   139 LPQVTQQVT--HPQQQQQQPVV------YASCKLQAAVGGLGMVPEG-------GSPPLVDQMSG 188

Mouse   117 --------FPGALGRAADEGG-----------AHVHYATSAVFSGGGSFLLSGQVDFAAFGEP-- 160
                    .|..:|....:.|           .|.::....::        ..|......|.|
  Fly   189 HHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMY--------QQQSGVPPVGAPPQ 245

Mouse   161 -------GPFPACLKEPADGHPGPFQTVSPAPGACPKPASPTSSLPAAHSTFEWMKVKRNAPKKS 218
                   ||     .:...||||  |...|:    ..|.|.:|.:|:  ..:.||:
  Fly   246 GMMHQGQGP-----PQMHQGHPG--QHTPPS----QNPNSQSSGMPS--PLYPWMR--------- 288

Mouse   219 KLSEYGATSPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMK 283
              |::|........|..::..|..|||||||||:||||.||||||:.|.|.:.|:||||||||||
  Fly   289 --SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 351

Mouse   284 QKKRER 289
            .||..:
  Fly   352 WKKENK 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxd1	NP_034597.2	PRK04233	59..>105	CDD:305134	13/46 (28%)
		Antp-type hexapeptide	204..209		1/4 (25%)
		Homeobox	233..285	CDD:278475	34/51 (67%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	304..328
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	33/183 (18%)
		Homeobox	301..354	CDD:395001	34/52 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810