Protein Alignment Hoxc6 and ftz

DIOPT Version :9

• Sequence 1: XP_006520531.1
• Gene: Hoxc6 / 15425
• MGIID: 96197
• Length: 243
• Species: Mus musculus
• Sequence 2: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Alignment Length: 220
• Identity: 84/220 - (38%)
• Similarity: 102/220 - (46%)
• Gaps: 47/220 - (21%)

Mouse    22 PNVALNSTA-----YDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQEK 81
            |.|:...||     ||  :.:.|.....|...:.....||||                    .:.
  Fly   138 PAVSTKVTASPAPSYD--QEYVTVPTPSASEDVDYLDVYSPQ--------------------SQT 180

Mouse    82 DMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQD--QKASIQIYPWMQRMNSHSVCFVPGSLG-- 142
            ..|.|....|....|.||:.   ..|...|.||.  :|:|..:   .|.:| |.:...|...|
  Fly   181 QKLKNGDFATPPPTTPTSLP---PLEGISTPPQSPGEKSSSAV---SQEIN-HRIVTAPNGAGDF 238

Mouse   143 ---------VGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 198
                     .....|.:|.||.|:||||||||||||||||:||||||:|||||.|:|||||||||
  Fly   239 NWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQ 303

Mouse   199 NRRMKWKKESNLTSTLSGGGGGATA 223
            |||||.||:..|.|:....|.|.||
  Fly   304 NRRMKSKKDRTLDSSPEHCGAGYTA 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxc6	XP_006520531.1	Homeobox	153..206	CDD:395001	45/52 (87%)
ftz	NP_477498.1	FTZ	1..248	CDD:281812	29/138 (21%)
		Homeobox	257..310	CDD:278475	45/52 (87%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45659
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910