Protein Alignment Hoxc5 and Ubx

DIOPT Version :9

• Sequence 1: NP_783857.1
• Gene: Hoxc5 / 15424
• MGIID: 96196
• Length: 222
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 233
• Identity: 80/233 - (34%)
• Similarity: 103/233 - (44%)
• Gaps: 58/233 - (24%)

Mouse    26 NYGSASEVQASRYCYGGLDLSITFPPPA--PSNSLHG-VDMA-ANPRAHPDRPACSAAAAPGHAL 86
            |.|:|:.........||:.:.    |.|  |.:.:.| :|.: .:|.:|....|....:..|
  Fly   134 NGGNAANANGQNNPAGGMPVR----PSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSG--- 191

Mouse    87 GRDEAAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPWM------- 144
            |...|..:..|: ....|..|.......||    ..|||...:.|.| .:....||||
  Fly   192 GNGNAGGVQSGV-GVAGAGTAWNANCTISG----AAAQTAAASSLHQ-ASNHTFYPWMAIAGECP 250

Mouse   145 ---TKLHMSHE-----------------------------TDG--KRSRTSYTRYQTLELEKEFH 175
               ||..:..:                             |:|  :|.|.:||||||||||||||
  Fly   251 EDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFH 315

Mouse   176 FNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKD 213
            .|.|||||||||:|:.|||.||||||||||||||.||:
  Fly   316 TNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxc5	NP_783857.1	COG5373	65..>142	CDD:227665	16/76 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	68..141		15/72 (21%)
		Antp-type hexapeptide	140..145		4/14 (29%)
		Homeobox	158..212	CDD:395001	43/53 (81%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	43/52 (83%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	116	1.000	Inparanoid score	I4804
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45659
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.960