DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and HGTX

DIOPT Version :10

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:321 Identity:82/321 - (25%)
Similarity:109/321 - (33%) Gaps:103/321 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 SSYYVDSIISHESEDAPP---------------AKFPSGQYANPRQPGHAEHLDFPSC------- 50
            ||...|...:.||...||               |||......||....:|.|...|.|       
  Fly   220 SSGAEDPCQTSESASPPPQGQNDYSPENLSSQRAKFQHHHGVNPLALHNANHAGNPGCHNNNNHM 284

Mouse    51 ------SF-------------QPKAPVFGASWAPL-------SPHA----------SGSLPSVYH 79
                  ||             :.|....|.|.|..       ||::          |.|..|...
  Fly   285 DHKLPLSFLGPPLAALHSMTTEMKGQGVGGSSASANGLSYSHSPNSHLISDRGSGGSSSSSSTTT 349

Mouse    80 PYLQPQGAPAAESRYLRTWLEPAPRAEAAPGQGQAAVKAEPLLGAPGELLKQGTPEYSL-ETSAG 143
            .....||||....  :.|.|...|...:|   |.:|     |.||       |.|.:|: ..:||
  Fly   350 TNTNSQGAPNPHG--IDTILSKPPPVTSA---GLSA-----LTGA-------GIPRFSIAAAAAG 397

Mouse   144 REAVLSNQR-------AGYGDNK-----------ICEGSEDKERPDQT---NPSANWLHARSS-- 185
            ....||..:       ||:..::           :......:||...|   |.|.:..|..|:  
  Fly   398 MAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDK 462

Mouse   186 --RKK--RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242
              :||  |..::..|...|||.|....||....|.::|..|.:||.|||:||||||.|.:|
  Fly   463 DGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 51/240 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 9/41 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 5/24 (21%)
Homeodomain 186..242 CDD:459649 25/57 (44%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 41/184 (22%)
Homeodomain 465..523 CDD:459649 25/57 (44%)

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