DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and C15

DIOPT Version :10

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:184 Identity:50/184 - (27%)
Similarity:69/184 - (37%) Gaps:56/184 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse    72 GSLPSVY-HPYLQPQGAPAAESRYLRTWLEPAPRAEAAPGQGQAAVKAEPLLGAPGELLKQGTPE 135
            ||..::| :|:|.|.   ||....||...:..|...|.|          ||              
  Fly   144 GSAAALYSYPHLYPS---AAGGHVLRVPPQRTPLTWALP----------PL-------------- 181

Mouse   136 YSLETSAGREAVLSNQRAGYGDNKICEGSEDKERPDQTNPSANWL-HARSSR------KKRCPYT 193
                    ..|.|::|..             |:|.....|.|..: |...:|      |.|..:|
  Fly   182 --------HHAALAHQAV-------------KDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFT 225

Mouse   194 KYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQ 247
            :.|..||||.|....||....|..:||.|.:::.|||.||||||.|.::...|:
  Fly   226 RIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 20/100 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 4/22 (18%)
Homeodomain 186..242 CDD:459649 26/61 (43%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 30/84 (36%)
Homeodomain 218..274 CDD:459649 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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