DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and Antp

DIOPT Version :10

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:365 Identity:94/365 - (25%)
Similarity:136/365 - (37%) Gaps:134/365 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 TLSSYYVDSIIS----------------------HESEDA------PPAKFP--------SGQ-- 32
            :::||:.:|.:.                      |.|::|      |..:||        :||  
  Fly    10 SMTSYFTNSYMGADMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYNGQGM 74

Mouse    33 --------YANPRQPGHAEHLDFPSC---SFQPKAPVFGASWAPLSPHASGSLPSVYHPYLQPQG 86
                    |:.|         |.||.   ...|:|...|....|.........||......|.|.
  Fly    75 DQQQQHQVYSRP---------DSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQ 130

Mouse    87 APAAESRYLRTWLEPAPRAEAAPGQGQ------AAVKAEPLLGAPGELLKQGTP----------- 134
            ||    :.|:..|....:....|.|.|      |:.|.:..:|..|.:.:.|:|           
  Fly   131 AP----QQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHM 191

Mouse   135 --EYSLETSAGR-EAVLS----------------------NQRA---------------GYGDNK 159
              :.:|....|. :|.|.                      .|::               |.|..:
  Fly   192 NAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQ 256

Mouse   160 ICEGSEDKERPDQTNPSAN----------WLHAR----SSRKK-RCPYTKYQTLELEKEFLFNMY 209
            :.:|...:..|...||::.          |:.::    ..||: |..||:||||||||||.||.|
  Fly   257 MHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRY 321

Mouse   210 LTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGK 249
            |||.||.|:|..|.|:|||:||||||||||.||.||.:|:
  Fly   322 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 46/271 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 9/50 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 5/31 (16%)
Homeodomain 186..242 CDD:459649 40/56 (71%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 21/144 (15%)
Homeodomain 298..354 CDD:459649 39/55 (71%)

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