DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and unpg

DIOPT Version :10

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:286 Identity:75/286 - (26%)
Similarity:106/286 - (37%) Gaps:69/286 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse    10 YYVDSIISHESEDAPPAKFPSGQYANPRQPGHAEHLDFPSCSFQPKAP-VFGASWAPLSPHASGS 73
            |...|...|.:...|.|: ...|...|..|.||.....|     |..| .....:.|.:|.|:|.
  Fly   109 YLPSSPAGHPAAQQPQAQ-AQPQPPPPHPPTHALEKQLP-----PTLPHPLDTRFLPFNPAAAGV 167

Mouse    74 LPS-------------------VYHPYLQPQGAPAAESRYLRTWLEPA---------PRAEAAPG 110
            .|:                   ..|..||..   ||..|.......|.         |:|.::|.
  Fly   168 APTDLSYRRLAELMNQDYVHSLSVHARLQHM---AAAGRMHEDQANPGMAQLQEPTPPQAHSSPA 229

Mouse   111 QGQAAVKAEPLLG--------APGE-----LLKQGTPEYSLETSAGREAVLSNQRAGYGDNKIC- 161
            :..:....||.|.        ..|:     .|......|:.|....|....:|     .|::.| 
  Fly   230 KSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTN-----SDSEDCS 289

Mouse   162 --EGSEDKE-------RPDQTNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHE 217
              ||::.:.       :..|.|.|::   ...||::|..:|..|.||||:||....||:...|.:
  Fly   290 DDEGAQSRHEGGGMGGKDSQGNGSSS---NSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQ 351

Mouse   218 VARLLNLSERQVKIWFQNRRMKMKKM 243
            :|..|.|||.||||||||||.|.|::
  Fly   352 IATSLKLSEVQVKIWFQNRRAKWKRV 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 41/213 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 6/31 (19%)
Homeodomain 186..242 CDD:459649 29/55 (53%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 27/51 (53%)

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