DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb8 and ftz

DIOPT Version :10

Sequence 1:NP_034591.1 Gene:Hoxb8 / 15416 MGIID:96189 Length:243 Species:Mus musculus
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:192 Identity:67/192 - (34%)
Similarity:87/192 - (45%) Gaps:64/192 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse    39 VYGPSS------GGSFQHPSQIQEFYHGPSSL------STAPYQQNPCAVACHGDPGNFYGYDPL 91
            ||.|.|      .|.|..|....     |:||      ||.|  |:|                  
  Fly   173 VYSPQSQTQKLKNGDFATPPPTT-----PTSLPPLEGISTPP--QSP------------------ 212

Mouse    92 QRQSLFGAQDPDLV-QYADCKLAAA-SGLGEEAEGSEQSPSPTQLFPWMRPQAAAG-----RRRG 149
                  |.:....| |..:.::..| :|.|:              |.|...:....     .:|.
  Fly   213 ------GEKSSSAVSQEINHRIVTAPNGAGD--------------FNWSHIEETLASDCKDSKRT 257

Mouse   150 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFP 211
            ||||:|||||||||||.||.|:||:|||::::||.|:|||:||||||||||.||:...|..|
  Fly   258 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb8NP_034591.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeodomain 147..203 CDD:459649 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..243 3/9 (33%)
ftzNP_477498.1 FTZ 1..248 CDD:397787 23/119 (19%)
Homeodomain 255..311 CDD:459649 40/55 (73%)
KLF1_2_4_N <321..404 CDD:425360
Blue background indicates that the domain is not in the aligned region.

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