Protein Alignment Hoxb6 and ro

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 295
• Identity: 87/295 - (29%)
• Similarity: 104/295 - (35%)
• Gaps: 94/295 - (31%)

Mouse    44 HPFESGGGQNPPSSAKARRSDYKTQQIINPAEQQRPRAPPLPMSSYFVNSTFPVTLASGQESFLG 108
            |..|.|   :|..|...:||| ....|.|......|:.|..|...:              |...|
  Fly     4 HKVEIG---SPDGSPGIKRSD-SLDPIANTTILSVPQRPSSPRQFF--------------ERLYG 50

Mouse   109 QLPLYSS--GYAD--PLRHYP----APYGPGPG---------QDKGFAASSYYPPAGGGYGRAAP 156
            .|...||  |..|  ...|.|    .||....|         .|:..:.::|  ||...||.|.
  Fly    51 HLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAY--PAYDFYGHAK- 112

Mouse   157 CDYGPAPA---------------------FYREKDAACALSGADEP--PPFHPEPRKSDCAQDKS 198
             ||...|:                     .|.....|.|..||..|  |...|....||
  Fly   113 -DYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSD------ 170

Mouse   199 VFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRR--GRQ-----TYTRYQTLELEKEFHYNRYL 256
                        |.:       |...|:|....||  |||     |::..|||.||.|||.|.|:
  Fly   171 ------------PHF-------SAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYI 216

Mouse   257 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 291
            :|.||.|:|..|.|||.||||||||||.|.|:..|
  Fly   217 SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	36/62 (58%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	31/51 (61%)