Protein Alignment Hoxb6 and C15

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Alignment Length: 308
• Identity: 73/308 - (23%)
• Similarity: 112/308 - (36%)
• Gaps: 77/308 - (25%)

Mouse     4 SEKRNNLSLKSEKGKRRLSGWDNIIWKLKKIPNAPLSLPPHPFESGG---GQNPPSSAKARRSDY 65
            ||...:.||:||  :.|.|..:|:.:.:.::.:.|.....|...:..   ..:|.||:....|..
  Fly    53 SETPLSESLQSE--QTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGE 115

Mouse    66 KTQQIINPAEQQRPRAPPLPMSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGP 130
            |.::  ....||........:::...|||:                    |.|..|..||
  Fly   116 KGEE--KELLQQEDHDLAYKLATSIANSTY--------------------GSAAALYSYP----- 153

Mouse   131 GPGQDKGFAASSYYPPAGGGYGRAAPCDYGPAPAFYREKDAACALSGADEPPPFHPEPRKSDCAQ 195
                       ..||.|.||:....|....|         ...||      ||.|.........:
  Fly   154 -----------HLYPSAAGGHVLRVPPQRTP---------LTWAL------PPLHHAALAHQAVK 192

Mouse   196 DKSVFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 260
            |:           ....:|..:|:.....:...|..::.|.::||.|..||||.||..:||....
  Fly   193 DR-----------LAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAE 246

Mouse   261 RIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPA 308
            |..:|..|.:|:.|:|.||||||.||::        |.:.|.|.|:.|
  Fly   247 RAALARGLKMTDAQVKTWFQNRRTKWRR--------QTAEEREAERQA 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	26/55 (47%)
C15	NP_476873.2	COG5576	<196..315	CDD:227863	34/99 (34%)
		Homeodomain	218..274	CDD:459649	26/55 (47%)