DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb6 and CG15696

DIOPT Version :10

Sequence 1:XP_006532355.1 Gene:Hoxb6 / 15414 MGIID:96187 Length:309 Species:Mus musculus
Sequence 2:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster


Alignment Length:142 Identity:39/142 - (27%)
Similarity:60/142 - (42%) Gaps:23/142 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse   183 PFHPEPRKSDCAQDKSVFG---ETEEQKCSTPVYPWMQ----------RMNSCNSSSFGPSGRRG 234
            ||||....:.....:|  |   .....:...|||.|:|          |....|:.:....||..
  Fly    35 PFHPYAHPASYVSKES--GGSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLP 97

Mouse   235 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK-------- 291
            |..:|..|...||..:..:.||:.....::|.:|.||..::||||||||.:.::|.:        
  Fly    98 RIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKDESCDS 162

Mouse   292 LLSASQLSAEEE 303
            ..|::..|.|.|
  Fly   163 TFSSNASSPEPE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb6XP_006532355.1 Homeodomain 232..288 CDD:459649 20/55 (36%)
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 16/48 (33%)

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