Protein Alignment Hoxb6 and abd-A

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 301
• Identity: 106/301 - (35%)
• Similarity: 123/301 - (40%)
• Gaps: 60/301 - (19%)

Mouse    40 SLPPHPFESGG-------GQNPPSSAKARRSDYKTQQIINPAEQQRPRA------PPLPMSSYFV 91
            |..|.|..||.       ..|.|.||.|..|......:...|......|      |...|..|..
  Fly   202 SCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVS 266

Mouse    92 NSTFPVTLASGQESFLGQLPLYSSGYADP-LRHYPAPYGPGPGQDKGFAASSYYPPAGGGYGRAA 155
            |........||...|.|......|.|.|. :..|.:...|.       :||:.:
  Fly   267 NHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPA-------SASAQF----------- 313

Mouse   156 PCDYGPAPAFYREKDAACALSGADEPPPFHPEPRKSDCAQDKS-----VFGETEEQKCSTPVYPW 215
                   ..||:...||.:...|........:...:.|.|..|     ..|.........|.|||
  Fly   314 -------AQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPW 371

Mouse   216 MQRMNSCNSSSF---------GPSG---RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHAL 268
            | .:.....|.|         ||:|   |||||||||:||||||||||:|.||||||||||||||
  Fly   372 M-TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHAL 435

Mouse   269 CLTERQIKIWFQNRRMKWKKESKLLSASQLSA---EEEEEK 306
            |||||||||||||||||.|||.:.:......|   .||:||
  Fly   436 CLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEK 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	51/55 (93%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	51/55 (93%)
		Abdominal-A	456..478	CDD:403567	6/21 (29%)