Protein Alignment Hoxb6 and ems

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 362
• Identity: 86/362 - (23%)
• Similarity: 126/362 - (34%)
• Gaps: 118/362 - (32%)

Mouse     3 ISEKRNNLSLKSEKGKRRLSGWDNIIWKLKKIPNAPLSL-----------PPHPFESGGGQNPPS 56
            :|..:..||.::|:.:..:|      .|.::.| ||.::           |||        .||.
  Fly   157 LSPLQTRLSPETEQPQMAVS------LKRERSP-APPAMEQAENPAQRIQPPH--------TPPK 206

Mouse    57 SAKARRSDYKTQQII-------NPAEQQRPRAPPLPMSSYFVNSTFPVTLASGQESFLGQLPLYS 114
            |...:.|...:...:       .|.:||:.:.||        |...|..:..|     |..|:..
  Fly   207 SVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPP--------NYPKPAMMHPG-----GAGPMMM 258

Mouse   115 SGYADPLRHYPAPYGPG----PGQDKGFAASSYYPP-----------------AGGGYGRAAPCD 158
            .|........|.|.|||    |....|.......||                 |...:..||...
  Fly   259 PGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQ 323

Mouse   159 ----YGPAPAFYREKDAACALSGADEPP---PFHPEPRKSDCAQDKSVFGETEEQKCSTPVYPWM 216
                .||         ||.|.:.|..||   .|.|.|   ..|:|            |..:|||:
  Fly   324 AGHVLGP---------AAAAAAAAGLPPHAAQFMPNP---GMARD------------SYQLYPWL 364

Mouse   217 QRMNS------CNSSSFGPSGRRGRQTYTRY---QTLELEKEFHYNRYLTRRRRIEIAHALCLTE 272
            ...:.      ...|...|..|:.::..|.:   |.|:||..|..|:|:....|..:|..|.|:|
  Fly   365 LSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSE 429

Mouse   273 RQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPAE 309
            .|:|:||||||.|.|:           .::|:||..|
  Fly   430 TQVKVWFQNRRTKHKR-----------MQQEDEKGGE 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	23/58 (40%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	22/55 (40%)