Protein Alignment Hoxb6 and Scr

DIOPT Version :9

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 278
• Identity: 101/278 - (36%)
• Similarity: 131/278 - (47%)
• Gaps: 74/278 - (26%)

Mouse    33 KIPNAPLSLPPHPFESGGG-----QNPPSSAKARRSDYKTQQIINPAE-QQRPRAPPLPMSSYFV 91
            |..|.|::    |..||||     .|..:||.:..::  :|.:.:|.: ..|..:|.|..||..
  Fly   168 KYANDPVT----PGGSGGGGVSGSNNNNNSANSNNNN--SQSLASPQDLSTRDISPKLSPSSVV- 225

Mouse    92 NSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFAASSYYPPAGGGYGRAAP 156
                        ||....|                        :||.        .||....||
  Fly   226 ------------ESVARSL------------------------NKGV--------LGGSLAAAA- 245

Mouse   157 CDYGPAPAFYREKDAACALSG--ADEPPPFH-PEPRKSDCAQDK-SVFGETEE----QKCSTPVY 213
                 |.|......:...:||  .:...|.| |....||...|. :..|.::.    :|....:|
  Fly   246 -----AAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKNPPQIY 305

Mouse   214 PWMQRMNSCNSSSFGPSG--RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIK 276
            |||:|:: ..:|:...:|  :|.|.:||||||||||||||:||||||||||||||||||||||||
  Fly   306 PWMKRVH-LGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 369

Mouse   277 IWFQNRRMKWKKESKLLS 294
            |||||||||||||.|:.|
  Fly   370 IWFQNRRMKWKKEHKMAS 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeobox	235..288	CDD:365835	49/52 (94%)
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	49/52 (94%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910