Protein Alignment Hoxb6 and bcd

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 123
• Identity: 37/123 - (30%)
• Similarity: 55/123 - (44%)
• Gaps: 13/123 - (10%)

Mouse   181 PPPFHPEPRKSDCAQDKSVFGETEEQKCSTPVYPWMQRM--NSCNSSSFGPS-----------GR 232
            |.|.|..|:.....|.::.|....:::.....|.:::..  |........||           .|
  Fly    34 PHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPR 98

Mouse   233 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKES 290
            |.|.|:|..|..|||:.|...||||..|..:::..|.|...|:||||:|||.:.|.:|
  Fly    99 RTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQS 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	25/55 (45%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)