DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb6 and CG34031

DIOPT Version :10

Sequence 1:XP_006532355.1 Gene:Hoxb6 / 15414 MGIID:96187 Length:309 Species:Mus musculus
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:58 Identity:29/58 - (50%)
Similarity:42/58 - (72%) Gaps:0/58 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse   232 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 289
            |:.||.|:..|...||.||:.::||:..:|:|::.:|.|||.|:|.||||||.||||:
  Fly   134 RKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb6XP_006532355.1 Homeodomain 232..288 CDD:459649 27/55 (49%)
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 27/55 (49%)

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