DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb6 and CG9876

DIOPT Version :10

Sequence 1:XP_006532355.1 Gene:Hoxb6 / 15414 MGIID:96187 Length:309 Species:Mus musculus
Sequence 2:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster


Alignment Length:112 Identity:31/112 - (27%)
Similarity:49/112 - (43%) Gaps:27/112 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse   224 SSSFGPSG---------------------------RRGRQTYTRYQTLELEKEFHYNRYLTRRRR 261
            ||:|||:|                           ||.|.|::..|...|||.|....|.....|
  Fly    83 SSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVR 147

Mouse   262 IEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPA 308
            .|:|..:.|:|.::::||||||.|:::..:.:.:..|.....:..||
  Fly   148 EELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPA 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb6XP_006532355.1 Homeodomain 232..288 CDD:459649 22/55 (40%)
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 22/55 (40%)

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