Protein Alignment Hoxb6 and lms

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 128
• Identity: 43/128 - (33%)
• Similarity: 58/128 - (45%)
• Gaps: 30/128 - (23%)

Mouse   186 PEPRKS----DCAQDKSVFGET--EEQKCSTPVYPWMQRMNSC--NSSSFGPSG----------- 231
            ||.|.|    |..||:|..|..  ...:.|:|.      .:||  ::...|.|.
  Fly    23 PEMRSSTSFEDSVQDESGRGGNCLGASRASSPA------TSSCLDDNMDDGKSDIDLASDDGNGL 81

Mouse   232 -----RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 289
                 :|.|..::..|...||.||...:||:..:|..:|..|.|||.||||||||||.|||::
  Fly    82 GDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	27/55 (49%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	17/78 (22%)
		Homeodomain	87..143	CDD:459649	27/55 (49%)