Protein Alignment Hoxb6 and scro

DIOPT Version :10

• Sequence 1: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 275
• Identity: 63/275 - (22%)
• Similarity: 100/275 - (36%)
• Gaps: 94/275 - (34%)

Mouse    65 YKTQQIINPAEQQRPRA-----PPLPM----SSYFVNSTFPVTLAS----------------GQE 104
            :....|::|.|:...:.     ||.|.    ||..:||  |.||.:                |.:
  Fly   116 FSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINS--PGTLTTSTMANPYAMGTLYHSPGVQ 178

Mouse   105 SFLGQLP-LYSSGYADPLRHYPAPYGPGPGQDKGFAASSYYPPAGGG----YGRAAPCDYGPAPA 164
            ::.|... |..:|:...:|:..:.|| ....|..||.|.....:..|    .|..:..
  Fly   179 TYCGPTDNLSLAGHYTDMRNSASWYG-STANDPRFAISRLMSSSASGTMSHMGNMSGL------- 235

Mouse   165 FYREKDAACALSGADEPPPFHPEPRKSDCAQDKSVFGETEEQKCSTPV-YPWMQRMNSCNSSSFG 228
                  |||::|.                               |.|: :|..||
  Fly   236 ------AACSVSD-------------------------------SKPLQFPLAQR---------- 253

Mouse   229 PSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLL 293
               |:.|..:|:.|..|||:.|...|||:...|..:|..:.||..|:||||||.|.|.|:::|
  Fly   254 ---RKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAK-- 313

Mouse   294 SASQLSAEEEEEKPA 308
             ...::.:.:..:||
  Fly   314 -EKAMAEQNQHNQPA 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	24/55 (44%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	24/55 (44%)