Protein Alignment Hoxb4 and ems

DIOPT Version :10

• Sequence 1: NP_034589.3
• Gene: Hoxb4 / 15412
• MGIID: 96185
• Length: 250
• Species: Mus musculus
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 264
• Identity: 79/264 - (29%)
• Similarity: 110/264 - (41%)
• Gaps: 58/264 - (21%)

Mouse     5 SFLINSNYVDPKFPPCEEYSQ--SDY-LPSDHSPGYYAGGQRRESGFQPEAAFGRRAPCTVQRYA 66
            :.||:|.:..   ||.::..|  .:| .|:...||  ..|.....| .|.|...|..|
  Fly   220 TLLISSPHAT---PPQQQQQQPPPNYPKPAMMHPG--GAGPMMMPG-MPPAGLVRPFP------- 271

Mouse    67 ACRDPGPPPPP------------PP----PPPPPP---PGLSPRAPVQPT----AGALLPEPGQR 108
              ..||.||.|            ||    ||..||   |.|...|..|..    ||.:|   |..
  Fly   272 --MGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVL---GPA 331

Mouse   109 SEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGG-------EPKRSRT 166
            :.|.:::..||..||...:|..:..:.:   :|||:...|.......:.|.       :|||.||
  Fly   332 AAAAAAAGLPPHAAQFMPNPGMARDSYQ---LYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRT 393

Mouse   167 AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGG 231
            |::..|:|:||..|..|:|:....|..:|..|.|||.|:|:||||||.|    ||....:...||
  Fly   394 AFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTK----HKRMQQEDEKGG 454

Mouse   232 TAGA 235
            ..|:
  Fly   455 EGGS 458

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb4	NP_034589.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..133		41/153 (27%)
		Antp-type hexapeptide	140..145		3/4 (75%)
		Homeodomain	162..218	CDD:459649	27/55 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	219..250		5/17 (29%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	28/59 (47%)