DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb4 and Dfd

DIOPT Version :10

Sequence 1:NP_034589.3 Gene:Hoxb4 / 15412 MGIID:96185 Length:250 Species:Mus musculus
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:105 Identity:76/105 - (72%)
Similarity:85/105 - (80%) Gaps:2/105 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse   137 EPVVYPWMRKVHVSTV-NPNYAGG-EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 199
            |.::||||:|:||:.| |.:|..| ||||.||||||.|:||||||||||||||||||:||||.|.
  Fly   340 ERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLV 404

Mouse   200 LSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGP 239
            ||||||||||||||||||||:||||||.....|..|.|.|
  Fly   405 LSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb4NP_034589.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133
Antp-type hexapeptide 140..145 3/4 (75%)
Homeodomain 162..218 CDD:459649 49/55 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..250 11/21 (52%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 49/55 (89%)
Blue background indicates that the domain is not in the aligned region.

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