DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb4 and zen2

DIOPT Version :9

Sequence 1:NP_034589.3 Gene:Hoxb4 / 15412 MGIID:96185 Length:250 Species:Mus musculus
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:98 Identity:46/98 - (46%)
Similarity:62/98 - (63%) Gaps:8/98 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse   139 VVYPWMR-KVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSE 202
            ::||.:. .|..:......:..:.||||||::..|::|||:|||.|:||.|.||:||:..|.|:|
  Fly    20 MMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTE 84

Mouse   203 RQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGA 235
            ||:||||||||||.||.   .|.|    |..||
  Fly    85 RQVKIWFQNRRMKLKKS---TNRK----GAIGA 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb4NP_034589.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133
Antp-type hexapeptide 140..145 2/4 (50%)
Homeobox 164..218 CDD:395001 34/53 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..250 5/17 (29%)
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/52 (65%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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