DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb4 and unpg

DIOPT Version :10

Sequence 1:NP_034589.3 Gene:Hoxb4 / 15412 MGIID:96185 Length:250 Species:Mus musculus
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:366 Identity:75/366 - (20%)
Similarity:135/366 - (36%) Gaps:96/366 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse  8567 RMARRDVVFLLDGSDGTRSSFSAMRDFVER-----------MVE-------RLNVSENRDRVSVV 8613
            |:||:.......|:.|:|:.:..:...|.|           ::|       .|||......|:::
  Fly   404 RIARKLFRPAFQGTAGSRTLYDVLTCLVTRVFMGYATFPFVLLEFKASLRMYLNVFMCLHLVALI 468

Mouse  8614 QYSRDPEAHFYLNTYSRKEDALDTIRGLRHKGGRPLNT-------GAALQYLRDNVFTASSGSRR 8671
            ..       |.|:.|..:.:......|.|.:.....:|       |||          |::||.|
  Fly   469 TV-------FILSKYVPRGEGSRAAAGARSRSKLKADTEDADQQSGAA----------ATTGSGR 516

Mouse  8672 VEGVPQLLILLSGTRSFDNVDT-PASSLKELGVLIFAIGSRSSDSQELQRVSNEPSYALSVREFS 8735
            .:.  ..|:..:||.....||| ||.|...      |.|.|...::..:|              |
  Fly   517 KDA--DALMKQAGTAVAAVVDTEPAGSNGS------AAGIRYRGAENGRR--------------S 559

Mouse  8736 DLSNVQQKLLSNINTALVEVTSLTTT----VTVESEGPKKDIIFLIDGSEDVGREFPIIQEFVRR 8796
            |:.:..|  :.|.|:|.:..||.|||    ......|||.....:   .|.:.:|...|::|:.:
  Fly   560 DVDSQHQ--IDNNNSATINTTSTTTTNNTSAAATKSGPKLACERI---KEKLEQETRNIEDFIDK 619

Mouse  8797 VVSNLNVGENKIRIGVVQYGDIPNADIYLNSHRTKEG--VLNGIKEL------------RQLRGT 8847
            .|:    |..:::..:::..|..:..:|:.......|  .|||...:            ..:.|.
  Fly   620 TVT----GFVELKDDLMRMPDETHGGLYIPRKAPLVGAAALNGNGNVVDGNSNSTAASGTTITGA 680

Mouse  8848 KRNLGQAID-FVRREVLASGRGGRKEEGVPQFVVVVSGGKA 8887
            ...:|.:.: |:::|:.|.....::...:|   .|:|.|.|
  Fly   681 TTGVGSSSNAFLKKEIDALNAAVQQANVLP---AVLSNGHA 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb4NP_034589.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133
Antp-type hexapeptide 140..145
Homeodomain 162..218 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..250
unpgNP_477146.1 Homeodomain 324..376 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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