DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb3 and CG34367

DIOPT Version :10

Sequence 1:NP_034588.2 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster


Alignment Length:347 Identity:78/347 - (22%)
Similarity:124/347 - (35%) Gaps:110/347 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse    63 HAKSKELNGSCMRPGLAPEP----------LPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKC 117
            |.::..|:.:..:..:.|:|          :.:.|..|..|..||::.:              :|
  Fly    98 HVETYSLSPTLHKAAVEPKPKNWLISEDLDVDSQPEDPKMSGLPTASIT--------------EC 148

Mouse   118 GAGSNSTLTKQIFPWMKESRQTSKLKNSSPGTAEGCGGGGGGGGGGGGGGGGSSGGGGGGGGGGD 182
            ...||                |.||....|...|.|                             
  Fly   149 TEDSN----------------TPKLAPDKPLLPEEC----------------------------- 168

Mouse   183 KSPPGS---------------AASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSE 232
            .||..|               ...:|:||.:|..||.|||:.|....|.....|.|::..|.|||
  Fly   169 VSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSE 233

Mouse   233 RQIKIWFQNRRMKYKK--DQKAKGLASSSGGPSPAGSPPQPMQSTAGFMN--ALHSMT-PSY--- 289
            .::::||||||.|.:|  :|..||....|..| |..:|.:|.: .|.:::  ||.|.: ||:   
  Fly   234 ARVQVWFQNRRAKCRKHENQMHKGFLVGSRSP-PIATPLEPCR-VAPYVSLAALRSSSVPSHPAA 296

Mouse   290 -DSPSPPAFG------KGHQNAYALPSNYQPPLKGCGAPQKYPPTPA-----SEYEPHVLQANGG 342
             .|.:|.|.|      .|.......|.|:.|.:.. .|.:::..|.|     |.::|.::.....
  Fly   297 ATSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISR-SAIKQFSSTVAAAAAFSAFDPAIISVAAH 360

Mouse   343 AYGTPTMQGSPVYVGGGGYADP 364
            .|......|:   |..|.::.|
  Fly   361 QYAAAITNGT---VPAGLFSVP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_034588.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 12/70 (17%)
Antp-type hexapeptide 129..134 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 10/73 (14%)
Homeodomain 192..248 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 8/26 (31%)
DUF4074 369..431 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 24/55 (44%)
OAR 392..410 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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