DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hoxb3 and E5

DIOPT Version :9

Sequence 1:NP_001073338.1 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:463 Identity:102/463 - (22%)
Similarity:145/463 - (31%) Gaps:176/463 - (38%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 ALFGGYSSYPGSNGFGYDGPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPG 77
            ||.|..:| |.:......|||.||.|....|...:|.:|.       .|.|.:.::.......| 
  Fly   167 ALIGNRTS-PNAMAVRMAGPPHPPSQPPPFLAAQFQMAAA-------LAHHHQQQQQQQQQQLP- 222

Mouse    78 LAPEPLP-APPGSP----PPSAAPTSTTSNSNNGGGPSKSGPPKCG---AGSNSTLTKQ---IFP 131
                |:| .||..|    ||...|.....     |||....||..|   .||...|.:.   ::|
  Fly   223 ----PVPTGPPHGPHPHLPPGQIPLGIFP-----GGPHPGHPPPHGHHPFGSAPHLIRDSYPLYP 278

Mouse   132 WMKESRQTSKLKNSSPGTAEGCGGGGGGGGGGGGGGGGSSGGGGGGGGGGDKSP--PGS------ 188
            |:. ||.                                          |...|  ||:      
  Fly   279 WLL-SRH------------------------------------------GRIFPRFPGNFLFQPF 300

Mouse   189 AASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 253
            ...||.|||::..||::||..|..|.|:....|.::|..|:|:|.|:|:||||||.|:|:.|:..
  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEG 365

Mouse   254 GLAS---SSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYDSPSPPA------------------F 297
            |..|   |:.|.|..|......:..|....:.|    ||:....|.                  :
  Fly   366 GDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQH----SYEDAEDPEDEDEIEEDDEDEVIDMDDY 426

Mouse   298 G-----KGHQNAYALPSNYQPPLKGCGAPQKYPPTPASEYEPHVLQANGGAYGTPTMQGSPVYVG 357
            |     :.||.   |...:|..|              ::::...:|.|.|.              
  Fly   427 GSEMDAEEHQR---LREQFQQQL--------------AQHQQQFMQQNAGE-------------- 460

Mouse   358 GGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAAPMGPNQHHGPCDPHPTYTDLSSHHAPPQG 422
                                              ||.:.|.|.|.....|..:.. ..||...|.
  Fly   461 ----------------------------------AATLSPQQQHQLLQQHQQHLQ-QQHHQQQQH 490

Mouse   423 RIQEAPKL 430
            .||:..:|
  Fly   491 FIQQQQQL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_001073338.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 18/68 (26%)
Antp-type hexapeptide 129..134 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 8/66 (12%)
Homeobox 195..248 CDD:365835 24/52 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 7/29 (24%)
DUF4074 369..431 CDD:372548 12/62 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433 12/42 (29%)
E5NP_524825.1 Homeobox 307..359 CDD:278475 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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