DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb3 and E5

DIOPT Version :10

Sequence 1:NP_034588.2 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:463 Identity:102/463 - (22%)
Similarity:145/463 - (31%) Gaps:176/463 - (38%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 ALFGGYSSYPGSNGFGYDGPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPG 77
            ||.|..:| |.:......|||.||.|....|...:|.:|.       .|.|.:.::.......| 
  Fly   167 ALIGNRTS-PNAMAVRMAGPPHPPSQPPPFLAAQFQMAAA-------LAHHHQQQQQQQQQQLP- 222

Mouse    78 LAPEPLP-APPGSP----PPSAAPTSTTSNSNNGGGPSKSGPPKCG---AGSNSTLTKQ---IFP 131
                |:| .||..|    ||...|.....     |||....||..|   .||...|.:.   ::|
  Fly   223 ----PVPTGPPHGPHPHLPPGQIPLGIFP-----GGPHPGHPPPHGHHPFGSAPHLIRDSYPLYP 278

Mouse   132 WMKESRQTSKLKNSSPGTAEGCGGGGGGGGGGGGGGGGSSGGGGGGGGGGDKSP--PGS------ 188
            |:. ||.                                          |...|  ||:      
  Fly   279 WLL-SRH------------------------------------------GRIFPRFPGNFLFQPF 300

Mouse   189 AASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 253
            ...||.|||::..||::||..|..|.|:....|.::|..|:|:|.|:|:||||||.|:|:.|:..
  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEG 365

Mouse   254 GLAS---SSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYDSPSPPA------------------F 297
            |..|   |:.|.|..|......:..|....:.|    ||:....|.                  :
  Fly   366 GDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQH----SYEDAEDPEDEDEIEEDDEDEVIDMDDY 426

Mouse   298 G-----KGHQNAYALPSNYQPPLKGCGAPQKYPPTPASEYEPHVLQANGGAYGTPTMQGSPVYVG 357
            |     :.||.   |...:|..|              ::::...:|.|.|.              
  Fly   427 GSEMDAEEHQR---LREQFQQQL--------------AQHQQQFMQQNAGE-------------- 460

Mouse   358 GGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAAPMGPNQHHGPCDPHPTYTDLSSHHAPPQG 422
                                              ||.:.|.|.|.....|..:.. ..||...|.
  Fly   461 ----------------------------------AATLSPQQQHQLLQQHQQHLQ-QQHHQQQQH 490

Mouse   423 RIQEAPKL 430
            .||:..:|
  Fly   491 FIQQQQQL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_034588.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 18/68 (26%)
Antp-type hexapeptide 129..134 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 8/66 (12%)
Homeodomain 192..248 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 7/29 (24%)
DUF4074 369..431 CDD:463833 12/62 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433 12/42 (29%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 26/55 (47%)

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