DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hoxb3 and ey

DIOPT Version :9

Sequence 1:NP_001073338.1 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:504 Identity:109/504 - (21%)
Similarity:161/504 - (31%) Gaps:117/504 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 GGYSSYPGSNGFGYDGPPQPPFQAATHLEGDYQRSAC-SLQSLGNAAPHAKSKELNGSCMRPGLA 79
            ||..|...|...|.........|.||.|.......|. |.:.....|.:.|.:.||   .:....
  Fly   254 GGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEGSEQEAIYEKLRLLN---TQHAAG 315

Mouse    80 PEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGAGSNSTL---TKQIFP-------WMK 134
            |.||      .|..|||....|.::.|   ::|..|:...|::..|   .:|.:|       |..
  Fly   316 PGPL------EPARAAPLVGQSPNHLG---TRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWYP 371

Mouse   135 ESRQTSKLKN--------------------SSPGTAEGCGGGG-------------------GGG 160
            .|.....:.:                    |.|...|.....|                   |..
  Fly   372 TSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQ 436

Mouse   161 GGGGGGGGGSSGGGGGGGGGGDKSPPGSAASKRA----RTAYTSAQLVELEKEFHFNRYLCRPRR 221
            ....|.|.|.:..||....|..:........||.    ||::|:.|:..|||||....|.....|
  Fly   437 SDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFAR 501

Mouse   222 VEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG--LASSSGGPSPAGSPPQPMQSTAGFMNALHS 284
            ..:|..:.|.|.:|::||.|||.|:::::|.:.  ...:|.|.|...|......|.....|:|.:
  Fly   502 ERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSLSA 566

Mouse   285 ----MTPSYDSPSPPAFGKGHQNAYALPSNYQPPLKGCGAPQKYPPTPASEYEPHVLQANGGAYG 345
                ::.|...||.... .|..:...|.:|...|..|.|......|||.....|.....|.....
  Fly   567 CSSLLSGSAGGPSVSTI-NGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQ 630

Mouse   346 TPTMQG--SPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGN---------------LDYNGAA 393
            :...:.  ||..:|.||:.:                :||...|               |::|..:
  Fly   631 SEDCRRVCSPCPLGVGGHQN----------------THHIQSNGHAQGHALVPAISPRLNFNSGS 679

Mouse   394 --PMGPNQHH---------GPCDPHPTYTDLSSHHAPPQGRIQEAPKLT 431
              .|..|.||         |...|.|::...:.....|...|.:...||
  Fly   680 FGAMYSNMHHTALSMSDSYGAVTPIPSFNHSAVGPLAPPSPIPQQGDLT 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_001073338.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 15/60 (25%)
Antp-type hexapeptide 129..134 2/11 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 14/101 (14%)
Homeobox 195..248 CDD:365835 21/52 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 6/28 (21%)
DUF4074 369..431 CDD:372548 14/87 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433 12/54 (22%)
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 21/51 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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