Protein Alignment Hoxb3 and Ubx

DIOPT Version :9

• Sequence 1: NP_001073338.1
• Gene: Hoxb3 / 15410
• MGIID: 96184
• Length: 433
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 406
• Identity: 96/406 - (23%)
• Similarity: 115/406 - (28%)
• Gaps: 226/406 - (55%)

Mouse     1 MQKATYYDNTAAALFGGYSSYPGSNGFGYDGPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAK 65
            |....::|.||:|....|..:|.|.|..       |: |..||:...|.|
  Fly    23 MGSGGHHDQTASAAAAAYRGFPLSLGMS-------PY-ANHHLQRTTQDS--------------- 64

Mouse    66 SKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGAGSNSTLT---- 126
                                      |..|..:...|...|.|        .||.....|.
  Fly    65 --------------------------PYDASITAACNKIYGDG--------AGAYKQDCLNIKAD 95

Mouse   127 -----KQIFPWMKESRQTSKLKNSSPGTAEGCGGGGGGGGGGGGGG------------------- 167
                 |.|  |             :.|.:.|.|||||||||||.||
  Fly    96 AVNGYKDI--W-------------NTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQN 145

Mouse   168 ----------------------------------GGSSGG-----GGGGGGGGDKSPPG------ 187
                                              |||:||     ||.|..||.:|..|
  Fly   146 NPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGT 210

Mouse   188 ---------------SAAS---------------------------------------------- 191
                           :|||
  Fly   211 AWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKR 275

Mouse   192 --------------------KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIK 236
                                :|.|..||..|.:|||||||.|.||.|.||:|||:.|.|:|||||
  Fly   276 YSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 340

Mouse   237 IWFQNRRMKYKKDQKA 252
            |||||||||.||:.:|
  Fly   341 IWFQNRRMKLKKEIQA 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb3	NP_001073338.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..124		7/60 (12%)
		Antp-type hexapeptide	129..134		2/4 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	136..195		31/203 (15%)
		Homeobox	195..248	CDD:365835	36/52 (69%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	249..276		1/4 (25%)
		DUF4074	369..431	CDD:372548
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	389..433
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	36/52 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810