DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb3 and zen2

DIOPT Version :9

Sequence 1:NP_001073338.1 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:170 Identity:58/170 - (34%)
Similarity:77/170 - (45%) Gaps:43/170 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse   188 SAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKA 252
            |..|||:|||::|.||:|||:|||.|:||.|.||:|::..|.|:|||:||||||||||.||....
  Fly    40 SEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNR 104

Mouse   253 KGLASSSGGPSPAGS-PPQPMQ-----------------STAGFMNALH------SMTPSYDSPS 293
            ||...:.....|..| ..:.:|                 .||......|      .:||.|.|  
  Fly   105 KGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAPLRQVDHGVLEEGQITPPYQS-- 167

Mouse   294 PPAFGKGHQNAYALPSNYQPPLKGCGAPQKYPPTPASEYE 333
                       |.....:.|      .|...|..|.:|::
  Fly   168 -----------YDYLHEFSP------EPMALPQLPFNEFD 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_001073338.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124
Antp-type hexapeptide 129..134
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 4/6 (67%)
Homeobox 195..248 CDD:365835 34/52 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 5/44 (11%)
DUF4074 369..431 CDD:372548
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/52 (65%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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