DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb3 and pb

DIOPT Version :10

Sequence 1:NP_034588.2 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:359 Identity:104/359 - (28%)
Similarity:144/359 - (40%) Gaps:79/359 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 GGYSSYPGSNGFGYDG-PPQPPFQAATHLEGDY-QRSA-------CSLQSLGNAAPHAKSKELNG 71
            ||.....|..|.|..| ||.|.......:..:. :|||       .|.....|:.| :.::.|| 
  Fly    50 GGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQP-SMAEFLN- 112

Mouse    72 SCMRPGLAPE--PLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGAGSNSTLTKQIFPWMK 134
                 .|:||  .:..|.||........:...|...|.|......|:...|.:|.   ..:||||
  Fly   113 -----HLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSV---PEYPWMK 169

Mouse   135 ESRQTSKLKNSSPGTAEGCGGGGGGGGGGGGGGGGSSGGGGGGGGGGDKS----PPGSAASKRAR 195
            |.:.:.|..|::                                ..||.|    .|.:...:|.|
  Fly   170 EKKTSRKSSNNN--------------------------------NQGDNSITEFVPENGLPRRLR 202

Mouse   196 TAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK-----GL 255
            ||||:.||:|||||||||:|||||||:|:|..|:|:|||:|:||||||||:|:...:|     ..
  Fly   203 TAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK 267

Mouse   256 ASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYDSPSPPAFGKGHQNAYALPSNYQPPLKGCGA 320
            .|..|....:.|.....:|..|      ...||.|.|...:..:||.|.....:|..|.....  
  Fly   268 DSLKGDDDQSDSNSNSKKSCQG------CELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNL-- 324

Mouse   321 PQKYPPTPASEYEPHVLQANGGAYGTPTMQGSPV 354
                  ||.|..|..:   :....|:.|:..|.|
  Fly   325 ------TPNSSLETGI---SSNLMGSTTVSASNV 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_034588.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 13/62 (21%)
Antp-type hexapeptide 129..134 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 7/62 (11%)
Homeodomain 192..248 CDD:459649 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 5/31 (16%)
DUF4074 369..431 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433
pbNP_476669.3 Homeodomain 199..255 CDD:459649 40/55 (73%)
Blue background indicates that the domain is not in the aligned region.

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