DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb3 and Dbx

DIOPT Version :9

Sequence 1:NP_001073338.1 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:491 Identity:111/491 - (22%)
Similarity:160/491 - (32%) Gaps:170/491 - (34%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 ALFGGYSSYPGSN-------GFGYDGPPQPPF---QAATHLEGDYQRSACSLQSLGNAAPHAKSK 67
            |:.|...|:|.|:       |.|:...|.|.|   |...|.....|:             |.:.:
  Fly   215 AVPGHQHSHPHSHHHHHHHPGAGHAHFPHPAFLTHQLPPHQHHQQQQ-------------HVQQQ 266

Mouse    68 ELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGAGSNSTLTKQIFPW 132
            ....||.            |.:...|::|.||.|:|:|..|.|.:.....|.|::.         
  Fly   267 HPGNSCQ------------PQTASSSSSPGSTISDSDNNHGASTANGNGSGTGNSG--------- 310

Mouse   133 MKESRQTSKLKNSSPGTAEGC---------------GGGGGGGGGGGGGGGG------------- 169
              :..:..:|.||:|......               |.||.|||||||.|.|             
  Fly   311 --QDARPHELANSNPDEDSSASRRLTQDKQQQQQLLGAGGTGGGGGGGHGHGHPTPPPPPPPPVI 373

Mouse   170 ---------------------------------SSG--------GGGGGGGGGDKSPPGSAASKR 193
                                             |.|        |.|.......:..|.....:|
  Fly   374 AKPMPSRPTPFLPHTLNHPHLHSLLAHCRNPYMSVGAQVFPLPPGQGFPWAHSTRGKPRRGMMRR 438

Mouse   194 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASS 258
            |  .::.:|...|||.|...:|:.:|.|.::|..|.|.:.|:||||||||||::..::.:.||  
  Fly   439 A--VFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLA-- 499

Mouse   259 SGGPS----PAGSPPQPMQSTAGFMNALHSMTPSYDSPSPPAFGKGHQNAYALPSNYQPPLKGCG 319
            |||..    |..:.|.|..|.|.....|..::||..||:..|               .||..|..
  Fly   500 SGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLSPSLLSPNGSA---------------TPPPPGAV 549

Mouse   320 APQKYPPTPASEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPS 384
            |..:.|....:...|..:.:.    .:|::        |.|.....|||...||           
  Fly   550 AKDEPPTAAVTPKSPQSVSSR----SSPSV--------GYGLQISSPPPLLTSL----------- 591

Mouse   385 GNLDYNGAAPMGPNQHHGPCDPHPTYTDLSSHHAPP 420
                     .||.........|.|..|..|:..:||
  Fly   592 ---------KMGDQSASATPTPLPGTTVSSAAASPP 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_001073338.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 15/60 (25%)
Antp-type hexapeptide 129..134 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 22/127 (17%)
Homeobox 195..248 CDD:365835 22/52 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 9/30 (30%)
DUF4074 369..431 CDD:372548 10/52 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433 8/32 (25%)
DbxNP_647677.2 Homeobox 437..490 CDD:278475 24/54 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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