DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb3 and CG32532

DIOPT Version :9

Sequence 1:NP_001073338.1 Gene:Hoxb3 / 15410 MGIID:96184 Length:433 Species:Mus musculus
Sequence 2:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster


Alignment Length:329 Identity:78/329 - (23%)
Similarity:115/329 - (34%) Gaps:100/329 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse    93 SAAPTSTTSNSNNGGGPSKSGPPKCGAGSNSTLT-----KQIFPWMKESRQTSKLKNSSPGTAEG 152
            |..||....:|::...|:.:.|.:.   |:.|::     |::.|.......|.....:|||:   
  Fly   429 SGLPTPGMDSSSHHHTPAHTPPSRL---SDHTISAEGAFKKLKPEPNSGLSTVSAGITSPGS--- 487

Mouse   153 CGGGGGGGGGGGGGGGGSSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEF---HFNR 214
                           |.||.....|......|.| :.|.:|.||.:|..||.|||..|   |:..
  Fly   488 ---------------GLSSLSQHAGHTPTTASCP-TPARRRHRTTFTQEQLAELEAAFAKSHYPD 536

Mouse   215 YLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK--AKGLASSSGGPSPAGSPPQPMQSTAG 277
            ..||.   |:|....|:|.:|::||||||.||:|.:|  .|.||            |..:.|..|
  Fly   537 IYCRE---ELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALA------------PSVIPSCNG 586

Mouse   278 FMNALHSMTPSYDSPSPPAFGKGHQNAYALPSNYQPPLKGCGAPQKYP-PTPASEYEPHVLQANG 341
            .|..:                    ..|::...|||          || ....:.|...:.|...
  Fly   587 MMRNI--------------------QGYSVSRGYQP----------YPHHNTMNRYPQDLFQMGA 621

Mouse   342 GAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLN---------------HLSHHPSGNLDYNG 391
            .:|...|...|..:....|.........| ..:|::               :.||||      |.
  Fly   622 SSYPGMTQPFSMAHSTNMGSVGVRQDSMG-EFHGMSPEDEWYNKSLSALRMNSSHHP------NL 679

Mouse   392 AAPM 395
            :|||
  Fly   680 SAPM 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb3NP_001073338.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 7/30 (23%)
Antp-type hexapeptide 129..134 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..195 12/58 (21%)
Homeobox 195..248 CDD:365835 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..276 6/28 (21%)
DUF4074 369..431 CDD:372548 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..433 4/7 (57%)
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 24/55 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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