Protein Alignment Hoxb1 and abd-A

DIOPT Version :10

• Sequence 1: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 361
• Identity: 94/361 - (26%)
• Similarity: 124/361 - (34%)
• Gaps: 126/361 - (34%)

Mouse     7 SSFLEYPLCNRGPSAYSAPTSFPPCSAPAVDSYAGESRYGGGLPSS--ALQQNSGYP-VQQPPSS 68
            ||.|...|.:..|.:.||     ..||.|..|.|..:.......||  |:..:..|| |...|||
  Fly   212 SSSLHRSLNDNSPGSASA-----SASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSS 271

Mouse    69 LG-----------------------------VSFPSPAPSGYA-----PAACNPSYGPSQYYSVG 99
            .|                             :|.|:.|.:.:|     ..|...:...:...::|
  Fly   272 HGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIG 336

Mouse   100 QSEGDGSYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYGTEQTATFASAYDLLSEDKESPC 164
            ......:...|:|     |.:|.:.||||.|....  |:.|:
  Fly   337 VDSLGNACTQPAS-----GVMPGAGGAGGAGIADL--PRYPW----------------------- 371

Mouse   165 SSEPSTLTPRTFDWMKVKRNPPKTGRAQRSHFLSLARAYTEGPEPGLHSFLQLLLLAAKVSELGL 229
                .|||    |||             .|.|..:......||.
  Fly   372 ----MTLT----DWM-------------GSPFERVVCGDFNGPN--------------------- 394

Mouse   230 GAP---GGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 291
            |.|   |  |..:|..|..|||||||||.||:|.||:|||..|.|.|.|:||||||||||.||..
  Fly   395 GCPRRRG--RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 457

Mouse   292 REGGRMPAGPPGCPKEAAGDASDQSACTSPEASPSS 327
            |....:       .::|..|..:|....:.|...|:
  Fly   458 RAVKEI-------NEQARRDREEQEKMKAQETMKSA 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	34/52 (65%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	35/57 (61%)
		Abdominal-A	456..478	CDD:403567	4/28 (14%)