Protein Alignment Hoxb1 and Ubx

DIOPT Version :9

• Sequence 1: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 332
• Identity: 87/332 - (26%)
• Similarity: 121/332 - (36%)
• Gaps: 110/332 - (33%)

Mouse    15 CNR----GPSAYSAPTSFPPC---SAPAVDSY---------------------------AGESRY 45
            ||:    |..||.     ..|   .|.||:.|                           .|....
  Fly    74 CNKIYGDGAGAYK-----QDCLNIKADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNA 133

Mouse    46 GGGLPSSALQQNS---GYPVQQPPSSLGVSFPSPAPSGYAPAACNP----------SYGPSQYYS 97
            .||..::|..||:   |.||:                   |:||.|          |.|....:.
  Fly   134 NGGNAANANGQNNPAGGMPVR-------------------PSACTPDSRVGGYLDTSGGSPVSHR 179

Mouse    98 VGQSEGDGSYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYGTEQTATFASAYDLLSEDKES 162
            .|.:.|:.|.   |......||:....|..|.|:.        :....|.:.|:|        ::
  Fly   180 GGSAGGNVSV---SGGNGNAGGVQSGVGVAGAGTA--------WNANCTISGAAA--------QT 225

Mouse   163 PCSSEPSTLTPRTF-DWMKV----KRNPPKTG-RAQRSHF----LSLARAYTEGPEPGLHSFLQL 217
            ..:|.....:..|| .||.:    ..:|.|:. |:..:.:    ..:.:.|:|.        |..
  Fly   226 AAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSES--------LAG 282

Mouse   218 LLLAAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQN 282
            .||...:...||...|  |..:|..|..|||||||.|.||:|.||:|:|..|.|.|.|:||||||
  Fly   283 SLLPDWLGTNGLRRRG--RQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 345

Mouse   283 RRMKQKK 289
            ||||.||
  Fly   346 RRMKLKK 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb1	XP_006532343.1	Homeobox	236..289	CDD:365835	32/52 (62%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	32/52 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810