Protein Alignment Hoxb1 and ems

DIOPT Version :10

• Sequence 1: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 332
• Identity: 92/332 - (27%)
• Similarity: 120/332 - (36%)
• Gaps: 77/332 - (23%)

Mouse    19 PSAYSAPTSFPPCSAPAVDSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPA---PSG 80
            |....:|.|..|.|:|.:            |.||..........||||.    ::|.||   |.|
  Fly   204 PPKSVSPQSSQPSSSPTL------------LISSPHATPPQQQQQQPPP----NYPKPAMMHPGG 252

Mouse    81 YAPAACNPSYGPSQYYSVGQSEGDGSYFHPSSYGAQLGGLPDSYGAGGV----GSGPY---PPPQ 138
            ..|... |...|:            ....|...|.  ||.|...|..|:    ...||   ||..
  Fly   253 AGPMMM-PGMPPA------------GLVRPFPMGP--GGPPMPQGQPGLPDIKALPPYINAPPEL 302

Mouse   139 PPYGTEQ---TATFASAYDLLSEDKESPCSSEPST--LTPRTFDWMKVKRNPPKTGRAQRSHFL- 197
            ||.....   .|.|..|..|.:.....|.::..:.  |.|....:|      |..|.|:.|:.|
  Fly   303 PPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFM------PNPGMARDSYQLY 361

Mouse   198 --SLARAYTEGPEPGLHSFLQLLLLAAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRA 260
              .|:|.....|    |.|....|:..      ...|..:||.|:..||.:||..|..|:|:..|
  Fly   362 PWLLSRHGRIFP----HRFPGSFLVPP------FRKPKRIRTAFSPSQLLKLEHAFESNQYVVGA 416

Mouse   261 RRVEIAATLELNETQVKIWFQNRRMKQKKRERE---GGRMPAGPPGCPKEAAGDASD-------Q 315
            .|..:|..|.|:|||||:||||||.|.|:.::|   ||.  .|........:||..|       .
  Fly   417 ERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGE--GGSQRNMHNGSGDEDDDELIDMEM 479

Mouse   316 SACTSPE 322
            ..|.|.|
  Fly   480 DECPSDE 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	27/52 (52%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	27/55 (49%)