Protein Alignment Hoxb1 and bsh

DIOPT Version :10

• Sequence 1: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Sequence 2: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Alignment Length: 339
• Identity: 99/339 - (29%)
• Similarity: 128/339 - (37%)
• Gaps: 89/339 - (26%)

Mouse    16 NRGPSAYS-APTSFPPCSAPAVDSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPAPS 79
            ::.||.:| .|.|.||.||.|..:....|.          |..|||..:    ..|.|..|...|
  Fly    99 HKHPSQHSHPPQSHPPASASASATATARSN----------QAASGYAGE----DYGKSMHSTPRS 149

Mouse    80 GYAPAACNPSYGPSQYY--SVGQSEGDGSYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYG 142
            .:     :..:|.|.|.  .:.|..|.|:..||.....|                |.|||.||..
  Fly   150 NH-----HSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQ----------------PQPPPPPPLN 193

Mouse   143 TEQTATFASAYDLLSEDKESPCSSEPSTLTPRTFDWMKVKRNPPKTG--RAQRSHFLSLARAYTE 205
            ....|:....|      ..:|       .|...|..|.:....|.:|  ::...:|||.|..:..
  Fly   194 GGSGASNGVLY------PNAP-------YTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGG 245

Mouse   206 GP---EPGLHSFLQLLLLAAKVSELGLGAPGGL-----------RTNFTTRQLTELEKEFHFNKY 256
            .|   .||.            |.||.||...|:           ||.|:..||:.|||.|...:|
  Fly   246 APFFGAPGC------------VPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRY 298

Mouse   257 LSRARRVEIAATLELNETQVKIWFQNRRMKQKK--REREGGRMPA----GPPG-CPKEAAGDASD 314
            ||...|||:|..|.|:|||||.||||||||.||  |.|:....|.    ..|| .|.||...:.|
  Fly   299 LSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGD 363

Mouse   315 QSACTSPEASPSSI 328
            ..   ..:.:|.|:
  Fly   364 SK---HGKLNPGSV 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	31/52 (60%)
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	31/55 (56%)