Protein Alignment Hoxa7 and ro

DIOPT Version :10

• Sequence 1: NP_001406200.1
• Gene: Hoxa7 / 15404
• MGIID: 96179
• Length: 270
• Species: Mus musculus
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 345
• Identity: 88/345 - (25%)
• Similarity: 131/345 - (37%)
• Gaps: 113/345 - (32%)

Mouse    21 APAPSPPLCRAYTM-----STAPSI-RAPSRPAMAWE----------------PTPTTCPAPPTT 63
            :|..||.:.|:.::     :|..|: :.||.|...:|                ...|....||..
  Fly    10 SPDGSPGIKRSDSLDPIANTTILSVPQRPSSPRQFFERLYGHLETRSSENGEIDVGTHAHKPPPC 74

Mouse    64 KT---SPGSAVTSPKAPAT--RRTRACFT-------ARPKPVSASTPGCAVQSFFLSPSFL--SS 114
            .|   |.|.:|:||....:  |.:.|.:.       |:..|...|............|..|  ..
  Fly    75 DTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQK 139

Mouse   115 ISFLTP--------ALSPLLPF-FRPGFLSQRQGELRPPGSLTHHCTRGHFQNG-----AEANGT 165
            :|:::|        |.:|:||. |..||.|.                 .||..|     |.....
  Fly   140 LSYVSPPPAIAAGGAANPVLPHAFPAGFPSD-----------------PHFSAGFSAFLARRRRK 187

Mouse   166 EGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 230
            ||..| |.|.|::..|||.||.|||.|.|::|.||.|:|..|.|||.||||||||||.|.|:..|
  Fly   188 EGRQR-RQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251

Mouse   231 DE-------------------SQAPT----------------------AAPEDAVPSVSTA---- 250
            .:                   .||.|                      ||...|:|..:|.
  Fly   252 AQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALPKDNTQDANF 316

Mouse   251 ADKADEEEEEEEEEEEEEEE 270
            .|..|:.:.:::::::::::
  Fly   317 IDIDDQFQRQQQQKQQQQQQ 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa7	NP_001406200.1	Homeodomain	171..227	CDD:459649	33/55 (60%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	31/51 (61%)