DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa7 and abd-A

DIOPT Version :9

Sequence 1:NP_034585.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:229 Species:Mus musculus
Sequence 2:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster


Alignment Length:248 Identity:87/248 - (35%)
Similarity:120/248 - (48%) Gaps:48/248 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 AGASLFQNAEPTSCS----FAPNSQRSGYGPGAGAFASTVPGLYNVNSPLYQSPFASGYGLGADA 76
            :|.:.|...|..|||    ...||.:|...| |.|.|.......:..:.......||...:|.| 
  Fly   276 SGMAGFTGLEDKSCSRYTDTVMNSYQSMSVP-ASASAQFAQFYQHATAAASAVSAASAGAIGVD- 338

Mouse    77 YNLPCASYDQNIPGLCSDLAKGACDKADEGVLHGPAEASFRIYPWMR----------------SS 125
                      ::...|:..|.|....|  |...|...|....||||.                .:
  Fly   339 ----------SLGNACTQPASGVMPGA--GGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFN 391

Mouse   126 GPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
            ||:   |:||||||||:||||||||||||.|||||||||||||||||||||||||||||||.|||
  Fly   392 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456

Mouse   188 -----------HKDESQAPTAAPEDAVPSVSTAADKADEEEEEEEEEEEEEEE 229
                       .:|..:......::.:.|.........:::::::::::::::
  Fly   457 LRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQ 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa7NP_034585.1 Antp-type hexapeptide 118..123 3/4 (75%)
Homeobox 133..185 CDD:278475 49/51 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..229 4/53 (8%)
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 49/51 (96%)
Abdominal-A 456..478 CDD:289192 2/21 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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